Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,621,746 |
T→C |
I43M (ATA→ATG) |
ydeH ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,621,746 | 0 | T | C | 100.0%
| 759.1
/ NA
| 231 | I43M (ATA→ATG) | ydeH | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (123/108); total (123/108) |
Only 100 of 238 total aligned reads displayed.
CCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATT > NC_000913/1621656‑1621835
|
gAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCAttt > 2:3577822/1‑93 (MQ=255)
aaCGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTc > 2:5672030/1‑93 (MQ=255)
aCGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCt > 2:2428455/1‑93 (MQ=255)
aCGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCt > 2:6090002/1‑93 (MQ=255)
gTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTgg > 1:6206442/1‑93 (MQ=255)
gTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTgg > 2:5926507/1‑93 (MQ=255)
gTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAAACGGCACAGCGCATAAGAATGGTTATCACACATTTCTgg > 2:6281411/1‑93 (MQ=255)
tAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGc < 2:884644/93‑1 (MQ=255)
tAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGc > 2:5368340/1‑93 (MQ=255)
aGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCtt > 1:3055190/1‑93 (MQ=255)
ggTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTa > 1:1614685/1‑93 (MQ=255)
ggTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTa > 2:2159413/1‑93 (MQ=255)
gTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTAc > 1:1661177/1‑93 (MQ=255)
gTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTAc < 2:5090633/93‑1 (MQ=255)
tAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACt > 1:432757/1‑93 (MQ=255)
tAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACt < 1:384499/93‑1 (MQ=255)
tAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACt < 1:3804702/93‑1 (MQ=255)
tCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCa < 1:1542347/93‑1 (MQ=255)
cATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCAt > 2:3873893/1‑93 (MQ=255)
aTCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCAtc > 1:2562559/1‑93 (MQ=255)
aTCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCAtc < 2:5763944/93‑1 (MQ=255)
aTCGTTATCGAGTGGCCCAAGATGATCAATCCACCGACCAAACGGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCAtc < 2:5032895/93‑1 (MQ=255)
cGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCAtctc < 2:774655/93‑1 (MQ=255)
ttATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCAtctctc < 1:6013091/93‑1 (MQ=255)
atATCGAGTGGCCCCAGATGAACAATATACCGCACAAACATGCACAGCACATCAGAATGTATATACAACATTACTGTCTTATTGGCAtcacta > 2:2135995/2‑92 (MQ=255)
tATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTcg < 2:5206647/93‑1 (MQ=255)
tCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTcgcg > 2:822503/1‑93 (MQ=255)
cGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGa > 1:2510208/1‑93 (MQ=255)
gAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGAc > 2:2059464/1‑93 (MQ=255)
gAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGAc > 1:224149/1‑93 (MQ=255)
aGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGAcc > 1:28273/1‑93 (MQ=255)
gTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCa < 2:4411111/93‑1 (MQ=255)
gTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCa > 1:201711/1‑93 (MQ=255)
tGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCAc < 2:873233/93‑1 (MQ=255)
tGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCAc > 1:1114489/1‑93 (MQ=255)
tGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCAc > 1:3545499/1‑93 (MQ=255)
gCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGc < 2:2720388/93‑1 (MQ=255)
cccAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCtg < 2:3932843/93‑1 (MQ=255)
ccAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCtgt > 1:1425824/1‑93 (MQ=255)
ccAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCtgt < 1:5075508/93‑1 (MQ=255)
ccAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCtgt < 2:5732205/93‑1 (MQ=255)
gatCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACa < 1:183776/93‑1 (MQ=255)
gatCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACa < 2:3105540/93‑1 (MQ=255)
gatCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACa > 1:4053269/1‑93 (MQ=255)
atCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACAt < 1:532660/93‑1 (MQ=255)
atCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACAt > 2:5878358/1‑93 (MQ=255)
aTCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTc > 2:4223775/1‑93 (MQ=255)
tCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCa < 1:3257682/93‑1 (MQ=255)
tCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCa < 2:3524713/93‑1 (MQ=255)
tCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCa > 1:1792036/1‑93 (MQ=255)
cACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCAcc < 2:1953376/93‑1 (MQ=255)
cACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCAcc < 1:5896260/93‑1 (MQ=255)
aCCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCa > 2:131679/1‑93 (MQ=255)
aCCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCa > 2:4292033/1‑93 (MQ=255)
cGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGc < 1:5495949/93‑1 (MQ=255)
cGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGc > 2:5128796/1‑93 (MQ=255)
aCCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCa < 2:6028493/93‑1 (MQ=255)
ccAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATa < 1:2944296/81‑1 (MQ=255)
cAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACt < 2:3992395/93‑1 (MQ=255)
aaaCTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTg > 1:3004625/1‑93 (MQ=255)
aaCTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTgg < 1:3466819/93‑1 (MQ=255)
aaCTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTgg < 1:4883820/93‑1 (MQ=255)
tGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAg > 1:3904842/1‑93 (MQ=255)
ggCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCGTCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGt > 2:1463566/1‑93 (MQ=255)
gCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTg < 2:3387779/93‑1 (MQ=255)
acaGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTggg > 1:2666886/1‑93 (MQ=255)
caGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGc < 2:6183737/93‑1 (MQ=255)
aGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCa > 2:1718748/1‑93 (MQ=255)
gTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCAt < 2:5113962/93‑1 (MQ=255)
tCCAGAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATc < 1:882060/93‑1 (MQ=255)
ccATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCg < 2:296101/93‑1 (MQ=255)
aTAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCgct > 2:1181334/1‑91 (MQ=255)
aTAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGAt > 1:1439417/1‑93 (MQ=255)
tAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATa > 1:419337/1‑93 (MQ=255)
gAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGcc > 2:5496864/1‑93 (MQ=255)
gAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGcc > 2:3284968/1‑93 (MQ=255)
gAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGcc > 2:5798145/1‑93 (MQ=255)
gAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGcc > 1:2318272/1‑93 (MQ=255)
aaTGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCGCGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCt < 2:2461490/93‑1 (MQ=255)
aaTGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCt < 1:104254/93‑1 (MQ=255)
aaTGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCt > 2:2306247/1‑93 (MQ=255)
aTGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCtt < 1:781141/93‑1 (MQ=255)
aTGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCtt > 2:3659194/1‑93 (MQ=255)
tGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTa > 2:4912204/1‑93 (MQ=255)
tGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTa > 2:3173017/1‑93 (MQ=255)
ggTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTAt < 1:4114569/93‑1 (MQ=255)
ggTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTAt < 1:5371970/93‑1 (MQ=255)
gTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTAtt < 1:3398777/93‑1 (MQ=255)
ttATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGGCCACGCTGTGAAACATACTCGCCAGCCACTGGTAGTGGGCATCGATAGCCTTATTg < 2:4170687/93‑1 (MQ=255)
tATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTga < 1:440554/93‑1 (MQ=255)
aTCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTgag > 1:3690716/1‑93 (MQ=255)
aTCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTgag < 2:728719/93‑1 (MQ=255)
tCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTgaga > 1:3216806/1‑93 (MQ=255)
tCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTgaga < 1:5522275/93‑1 (MQ=255)
tCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTgaga < 1:5170359/93‑1 (MQ=255)
ccGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGAt > 1:3598509/1‑93 (MQ=255)
ccGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGAt > 1:5249981/1‑93 (MQ=255)
ccGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGAt > 1:4700260/1‑93 (MQ=255)
ccGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGAt < 1:1259637/93‑1 (MQ=255)
ccGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGAt > 1:462370/1‑93 (MQ=255)
|
CCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATT > NC_000913/1621656‑1621835
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TAGCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTTAAC > NC_000913/1621653‑1621839
|
TAGCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTC > SRR4302533.3118582/1‑94 (MQ=60)
GCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCAT < SRR4302533.4730181/94‑1 (MQ=60)
CCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATT < SRR4302533.3354328/94‑1 (MQ=60)
CCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATT > SRR4302533.1629409/1‑94 (MQ=60)
CGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTT < SRR4302533.3146243/94‑1 (MQ=60)
CGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTT > SRR4302533.3238822/1‑94 (MQ=60)
AACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCT > SRR4302533.861596/1‑94 (MQ=60)
CGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGG > SRR4302533.6243662/1‑94 (MQ=60)
GTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCTACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGC > SRR4302533.4465220/1‑94 (MQ=60)
TAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCT < SRR4302533.6092968/94‑1 (MQ=60)
AAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTT > SRR4302533.3073917/1‑94 (MQ=60)
AGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTA > SRR4302533.2547228/1‑94 (MQ=60)
AGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTA > SRR4302533.1624475/1‑94 (MQ=60)
GGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTAC > SRR4302533.1671220/1‑94 (MQ=60)
GTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACT < SRR4302533.2783811/94‑1 (MQ=60)
GTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACT > SRR4302533.435334/1‑94 (MQ=60)
TAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTG < SRR4302533.3827982/94‑1 (MQ=60)
TAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTG < SRR4302533.386820/94‑1 (MQ=60)
ATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGC > SRR4302533.3769111/1‑94 (MQ=60)
ATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGC < SRR4302533.2234410/94‑1 (MQ=60)
TTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCA > SRR4302533.1464058/1‑94 (MQ=60)
TTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCA < SRR4302533.3519779/94‑1 (MQ=60)
TCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCAT < SRR4302533.1551637/94‑1 (MQ=60)
TCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCAT < SRR4302533.2973184/94‑1 (MQ=60)
CATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATC > SRR4302533.4404412/1‑94 (MQ=60)
CATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATC < SRR4302533.5228287/94‑1 (MQ=60)
CATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATC > SRR4302533.2578335/1‑94 (MQ=60)
ATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCT > SRR4302533.3864008/1‑94 (MQ=60)
CGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCT > SRR4302533.6309447/1‑94 (MQ=60)
GTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTC > SRR4302533.3585000/1‑94 (MQ=60)
TTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCG > SRR4302533.392767/1‑94 (MQ=60)
TTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCG > SRR4302533.3031696/1‑94 (MQ=60)
TTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCG < SRR4302533.6049521/94‑1 (MQ=60)
ATCGAGTGGCGCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCG < SRR4302533.427142/94‑1 (MQ=60)
ATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCG < SRR4302533.1445742/94‑1 (MQ=60)
ATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCG > SRR4302533.409656/1‑94 (MQ=60)
ATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCG > SRR4302533.5381333/1‑94 (MQ=60)
TCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGA > SRR4302533.2525677/1‑94 (MQ=60)
CGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGAC > SRR4302533.225548/1‑94 (MQ=60)
GAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACC > SRR4302533.28465/1‑94 (MQ=60)
AGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCA > SRR4302533.202991/1‑94 (MQ=60)
GTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCAC > SRR4302533.1121098/1‑94 (MQ=60)
GTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCAC > SRR4302533.3567351/1‑94 (MQ=60)
GTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCAC < SRR4302533.2323091/94‑1 (MQ=60)
TGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACG > SRR4302533.2118325/1‑94 (MQ=60)
CCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTG < SRR4302533.195170/94‑1 (MQ=60)
CCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGT > SRR4302533.5966706/1‑94 (MQ=60)
CCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGT > SRR4302533.1434445/1‑94 (MQ=60)
CCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTG < SRR4302533.5106188/94‑1 (MQ=60)
CCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTG > SRR4302533.4919877/1‑94 (MQ=60)
CAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGA > SRR4302533.5615503/1‑94 (MQ=60)
CAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGA < SRR4302533.5229055/94‑1 (MQ=60)
CAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGA > SRR4302533.1810087/1‑94 (MQ=60)
AGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAA > SRR4302533.2407451/1‑94 (MQ=60)
AGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAA < SRR4302533.400266/94‑1 (MQ=60)
GATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAA < SRR4302533.5671751/94‑1 (MQ=60)
GATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAA < SRR4302533.1724697/94‑1 (MQ=60)
TGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACA > SRR4302533.284553/1‑94 (MQ=60)
TGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACA > SRR4302533.4077951/1‑94 (MQ=60)
GATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACAT < SRR4302533.184919/94‑1 (MQ=60)
ATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATA < SRR4302533.535829/94‑1 (MQ=60)
ATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATA > SRR4302533.1333192/1‑94 (MQ=60)
atctgctgtatACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATAC < SRR4302533.2962265/83‑1 (MQ=60)
ATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCA > SRR4302533.1802935/1‑94 (MQ=60)
ATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCA < SRR4302533.306538/94‑1 (MQ=60)
TCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCAC > SRR4302533.3480747/1‑94 (MQ=60)
TCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCAC < SRR4302533.3277773/94‑1 (MQ=60)
TCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCAC < SRR4302533.4818824/94‑1 (MQ=60)
CACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCA < SRR4302533.5931864/94‑1 (MQ=60)
CCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGC > SRR4302533.2664723/1‑94 (MQ=60)
CCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGC < SRR4302533.1580183/94‑1 (MQ=60)
CCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGC > SRR4302533.282493/1‑94 (MQ=60)
CGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCC < SRR4302533.5529097/94‑1 (MQ=60)
CGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCC > SRR4302533.1584208/1‑94 (MQ=60)
GACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCA > SRR4302533.5521710/1‑94 (MQ=60)
CAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTG > SRR4302533.3023005/1‑94 (MQ=60)
CAAACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTG < SRR4302533.420022/94‑1 (MQ=60)
AACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGT < SRR4302533.4913410/94‑1 (MQ=60)
AACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGT < SRR4302533.3488214/94‑1 (MQ=60)
AACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGT > SRR4302533.5321545/1‑94 (MQ=60)
AACTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGT < SRR4302533.1393147/94‑1 (MQ=60)
CTGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAG > SRR4302533.3928691/1‑94 (MQ=60)
TGGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGT < SRR4302533.1109850/94‑1 (MQ=60)
GGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTG < SRR4302533.4158893/94‑1 (MQ=60)
GGCACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTG < SRR4302533.25605/94‑1 (MQ=60)
CACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGG > SRR4302533.2683249/1‑94 (MQ=60)
CACAGTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGG < SRR4302533.4685437/94‑1 (MQ=60)
GTCCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATC > SRR4302533.4831502/1‑94 (MQ=60)
TCCAGAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCG < SRR4302533.887240/94‑1 (MQ=60)
CCATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGA < SRR4302533.3808805/94‑1 (MQ=60)
CATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGAT > SRR4302533.1448103/1‑94 (MQ=60)
CATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGAT < SRR4302533.5161579/94‑1 (MQ=60)
ATAAGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATA > SRR4302533.421850/1‑94 (MQ=60)
AAAAATGGTTACCCGTCATTTCTGGCGTGCTGGCACCTCTCGCGACCACGCTGTCAAACATCCCCACCAGCCACGGGTAGTGGGCATCGATAGC < SRR4302533.1298633/94‑1 (MQ=46)
AGAATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCC > SRR4302533.2332624/1‑94 (MQ=60)
AATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTT < SRR4302533.104906/94‑1 (MQ=60)
ATGGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTA < SRR4302533.785742/94‑1 (MQ=60)
GGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATT < SRR4302533.5404245/94‑1 (MQ=60)
GGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATT > SRR4302533.6257288/1‑94 (MQ=60)
GGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATT > SRR4302533.5531344/1‑94 (MQ=60)
GGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATT < SRR4302533.4139572/94‑1 (MQ=60)
GGTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATT < SRR4302533.4560932/94‑1 (MQ=60)
GTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCTCGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTG < SRR4302533.1751414/94‑1 (MQ=60)
GTTATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTG < SRR4302533.3419766/94‑1 (MQ=60)
TATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCCCCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAG < SRR4302533.1259328/94‑1 (MQ=60)
TATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAG > SRR4302533.3713392/1‑94 (MQ=60)
TATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAG < SRR4302533.443185/94‑1 (MQ=60)
ATCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGA > SRR4302533.3236639/1‑94 (MQ=60)
TCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCATCAGCCACTCGTAGAGGGCATCGATAGCCTTATTGAGAT > SRR4302533.3495760/1‑94 (MQ=60)
TCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGAT < SRR4302533.5201563/94‑1 (MQ=60)
TCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGAT > SRR4302533.4728759/1‑94 (MQ=60)
TCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGAT < SRR4302533.3927453/94‑1 (MQ=60)
TCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGAT > SRR4302533.3620647/1‑94 (MQ=60)
TCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGAT > SRR4302533.5281533/1‑94 (MQ=60)
TCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGAT < SRR4302533.5555619/94‑1 (MQ=60)
TCCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGAT > SRR4302533.465128/1‑94 (MQ=60)
CCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATT < SRR4302533.3637574/94‑1 (MQ=60)
CCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATT < SRR4302533.1267171/94‑1 (MQ=60)
CCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATT > SRR4302533.5528386/1‑94 (MQ=60)
CCGTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATT < SRR4302533.3308385/94‑1 (MQ=60)
GTCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTTA > SRR4302533.3445068/1‑94 (MQ=60)
TCATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTTAA < SRR4302533.5295639/94‑1 (MQ=60)
CATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCCCCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTTAAC < SRR4302533.128694/94‑1 (MQ=60)
CATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTTAAC > SRR4302533.2057321/1‑94 (MQ=60)
|
TAGCCGAACGTAAGGTAATTCATCGTTATCGAGTGGCCCCAGATGATCAATCCACCGACCAAACTGGCACAGTCCATAAGAATGGTTATCCGTTATTTCTGGCTTACTGGCATCTCTCGCGACCACGCTGTGAAACATACTCACCAGCCACTGGTAGTGGGCATCGATAGCCTTATTGAGATTTAAC > NC_000913/1621653‑1621839
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
