Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,632,141 |
T→C |
S166P (TCA→CCA) |
b1545 → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,632,141 | 0 | T | C | 100.0%
| 408.5
/ NA
| 140 | S166P (TCA→CCA) | b1545 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (63/77); total (63/77) |
Only 100 of 142 total aligned reads displayed.
ATAGTAAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGTCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCAAAGCAA > NC_000913/1632051‑1632213
|
aTAGTAAGAGCCCGCGGCGCAGATAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCa < 1:4008197/93‑1 (MQ=255)
aGTAAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAgg < 1:2963852/93‑1 (MQ=255)
aGTAAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAgg > 1:2420445/1‑93 (MQ=37)
gTAAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAggg > 1:5915152/1‑92 (MQ=255)
gTAAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGgt < 1:4108464/93‑1 (MQ=255)
gTAAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGgt > 1:2666838/1‑93 (MQ=37)
tAAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGgtg > 2:3614425/1‑93 (MQ=37)
tAAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGgtg > 1:1610621/1‑93 (MQ=37)
aaGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGgtgt < 2:4068914/93‑1 (MQ=255)
aaGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGgtgt < 1:2210715/93‑1 (MQ=255)
agagCCCGCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTa < 1:6079815/93‑1 (MQ=37)
agagCCCGCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTa > 2:3317532/1‑93 (MQ=37)
gagCCCGCGGCGCAGTGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTaa < 1:3615328/93‑1 (MQ=255)
gagCCCGCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAACCCAGGTGTaa > 1:2520187/1‑93 (MQ=255)
gCCCGCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGt > 1:4704499/1‑93 (MQ=37)
gCCCGCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGt < 2:5854373/93‑1 (MQ=255)
cccGCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGta > 2:1217520/1‑93 (MQ=37)
ccGCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGtat < 1:2120154/93‑1 (MQ=255)
cgcgGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGtata > 1:3011704/1‑93 (MQ=255)
cgcgGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGtata > 1:4129723/1‑93 (MQ=255)
cgcgGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGtata < 1:1024016/93‑1 (MQ=255)
gggcgCAGTGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAg < 1:143600/92‑1 (MQ=255)
cggcgCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAg < 2:4183357/93‑1 (MQ=255)
cggcgCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAg < 1:4609742/93‑1 (MQ=255)
cggcgCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAg < 1:651569/93‑1 (MQ=255)
ggcgCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGt < 1:5206668/93‑1 (MQ=255)
ggcgCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGt < 1:1150480/93‑1 (MQ=255)
ggcgCAGGGAAACGTTGTGGTCGACCACCTGTGTAAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGt < 2:1446102/93‑1 (MQ=255)
gcgcAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTg < 2:677126/93‑1 (MQ=255)
gcgcAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTg > 1:2239874/1‑93 (MQ=255)
cgcAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGc > 1:1897929/1‑93 (MQ=255)
cAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCa < 1:977789/93‑1 (MQ=255)
cAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCa < 1:2829913/93‑1 (MQ=255)
cAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCa < 1:2384355/93‑1 (MQ=255)
aGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCAt < 2:2852493/93‑1 (MQ=255)
aGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCAt < 2:5315379/93‑1 (MQ=255)
gggAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGTTGTAAGTATACGTGCCAtt < 2:6152707/93‑1 (MQ=11)
gggAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCAtt < 2:2568643/93‑1 (MQ=255)
gggAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCAtt < 2:2407313/93‑1 (MQ=255)
gggAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCAtt > 2:1436831/1‑93 (MQ=255)
ggAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTg > 1:3651944/1‑93 (MQ=255)
ggAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTg > 2:2563970/1‑93 (MQ=255)
gAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGc < 1:5343510/93‑1 (MQ=255)
gAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGc > 2:3721662/1‑93 (MQ=255)
gAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGc < 2:2111460/93‑1 (MQ=255)
aaaCGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGcc > 2:4644504/1‑93 (MQ=255)
aCGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTTGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCg > 2:1015707/1‑93 (MQ=255)
cGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCgg > 1:199712/1‑93 (MQ=255)
ttttGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGa > 2:5439490/1‑93 (MQ=255)
tttGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGaa < 2:1372279/93‑1 (MQ=255)
ggTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTc < 1:5937365/93‑1 (MQ=255)
ggTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTc < 2:2793223/93‑1 (MQ=37)
tCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCaa > 2:3618728/1‑93 (MQ=255)
cGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCaaa < 1:816123/93‑1 (MQ=37)
gACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCaaaa > 1:5890108/1‑93 (MQ=255)
gACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCaaaa > 2:2825527/1‑93 (MQ=37)
gACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCaaaa < 1:1893136/93‑1 (MQ=37)
gACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCaaaa > 2:1211011/1‑93 (MQ=255)
gACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCaaaa < 1:2695356/93‑1 (MQ=255)
acgcccTGTGTTAAATGAAGAACAGACACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAAc < 1:155973/89‑1 (MQ=11)
accaccTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAAc < 1:4247651/93‑1 (MQ=255)
accaccTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAAc > 1:4364531/1‑93 (MQ=255)
accaccTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAAc > 2:6286875/1‑93 (MQ=255)
accaccTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAAc < 2:3532350/93‑1 (MQ=255)
ccaccTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAAcc > 2:1639870/1‑93 (MQ=255)
accTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTc > 2:6172540/1‑93 (MQ=25)
accTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTc < 1:3099057/93‑1 (MQ=21)
accTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTc < 2:5806784/93‑1 (MQ=21)
accTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTc < 2:4555286/93‑1 (MQ=21)
cTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTcgc < 1:3888314/93‑1 (MQ=18)
cTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGGATAAGTGCCATTGCCCGGGAATTCAAAACGTcgc > 1:86078/1‑93 (MQ=255)
tgtgTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTcgcg > 2:5659825/1‑93 (MQ=21)
tgtgTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTcgcg < 1:93152/93‑1 (MQ=18)
gtgtTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCgg > 1:1089910/1‑93 (MQ=21)
gtgtTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCgg > 1:5457632/1‑93 (MQ=21)
gtgtTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCgg > 2:4065662/1‑93 (MQ=18)
tAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCaaa < 2:3733866/93‑1 (MQ=18)
aaaTGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAAc < 2:2668754/93‑1 (MQ=18)
aTGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCa < 2:2914827/93‑1 (MQ=18)
aTGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCa < 2:4735294/93‑1 (MQ=18)
aTGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCa < 2:2196643/93‑1 (MQ=18)
tGAAGAACAGAAACAGGCGGTATTCGTACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCAt < 2:4504847/93‑1 (MQ=16)
gaagaaCAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCAtt > 2:2608863/1‑93 (MQ=21)
aagaaCAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCAttt < 2:5873621/93‑1 (MQ=18)
aagaaCAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCAttt < 1:3134537/93‑1 (MQ=18)
agaaCAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCAtttt < 2:365749/93‑1 (MQ=18)
aaCAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAACTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTaa < 2:1570987/93‑1 (MQ=16)
aCAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAag > 2:5201351/1‑93 (MQ=21)
aCAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAag < 1:2967922/93‑1 (MQ=18)
cAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAaga > 1:5503664/1‑93 (MQ=18)
cAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAaga < 2:5598192/93‑1 (MQ=18)
aGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAagag > 1:2211937/1‑93 (MQ=21)
gAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGc > 1:4230566/1‑93 (MQ=18)
aaaCAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGcc > 2:5107255/1‑93 (MQ=21)
aaCAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCa > 1:4756313/1‑93 (MQ=21)
aCAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCaa < 1:1429535/93‑1 (MQ=18)
cAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCaaa > 2:5343903/1‑93 (MQ=18)
aGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCAAAg > 1:1459695/1‑93 (MQ=18)
ggCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCAAGGc < 1:2889978/93‑1 (MQ=16)
gCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCAAAGCa > 2:3454748/1‑93 (MQ=17)
|
ATAGTAAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGTCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCAAAGCAA > NC_000913/1632051‑1632213
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GGATAGTAAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGTCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCAAAGCAAAACTTCAGACACCTGACATA > NC_000913/1632049‑1632233
|
GGATAGTAAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCC > SRR4302533.2575292/1‑94 (MQ=26)
GGATAGTAAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCC < SRR4302533.5958318/94‑1 (MQ=26)
GGATAGTAAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCC > SRR4302533.5622/1‑94 (MQ=26)
GATAGTAAGAGCCCGCGGCGCAGGGAAACGTTTTGTTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCA < SRR4302533.1800174/94‑1 (MQ=25)
GATAGTAAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCA < SRR4302533.1134455/94‑1 (MQ=26)
GATAGTAAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCA < SRR4302533.4623286/94‑1 (MQ=26)
ATAGTAAGAGCCCGCGGCGCAGATAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAG < SRR4302533.4032602/94‑1 (MQ=23)
TAGTAAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGG > SRR4302533.2435393/1‑94 (MQ=25)
AGTAAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGT > SRR4302533.2683201/1‑94 (MQ=25)
AGTAAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGT < SRR4302533.2981971/94‑1 (MQ=25)
AGTAAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGG > SRR4302533.5950898/1‑94 (MQ=25)
GTAAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTG < SRR4302533.4133441/94‑1 (MQ=25)
GTAAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTG > SRR4302533.1620387/1‑94 (MQ=25)
GTAAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGGG > SRR4302533.2712321/1‑94 (MQ=25)
TAAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGT > SRR4302533.568090/1‑94 (MQ=25)
AAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTA < SRR4302533.1672298/94‑1 (MQ=25)
AAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTA < SRR4302533.2224349/94‑1 (MQ=25)
AGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAA < SRR4302533.6116585/94‑1 (MQ=25)
AGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAACCCAGGTGTAA > SRR4302533.2535716/1‑94 (MQ=24)
GAGCCCGCGGCGCAGTGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAG < SRR4302533.3637570/94‑1 (MQ=24)
AGCCCGCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGT > SRR4302533.4733013/1‑94 (MQ=25)
CCGCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATA > SRR4302533.4154792/1‑94 (MQ=25)
CCGCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATA < SRR4302533.2133229/94‑1 (MQ=25)
CCGCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATA > SRR4302533.3030129/1‑94 (MQ=25)
CGCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAA < SRR4302533.1030034/94‑1 (MQ=25)
GCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAG < SRR4302533.4571682/94‑1 (MQ=25)
GGGCGCAGTGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGT < SRR4302533.144520/94‑1 (MQ=24)
CGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGT < SRR4302533.345242/94‑1 (MQ=25)
CGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGT < SRR4302533.4637658/94‑1 (MQ=25)
CGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGT < SRR4302533.655419/94‑1 (MQ=25)
GGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTG < SRR4302533.5238039/94‑1 (MQ=25)
GGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTG > SRR4302533.2253716/1‑94 (MQ=25)
GGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTG < SRR4302533.1157371/94‑1 (MQ=25)
GCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGC > SRR4302533.1909518/1‑94 (MQ=25)
GCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCA > SRR4302533.2182984/1‑94 (MQ=25)
CAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCAT < SRR4302533.2847327/94‑1 (MQ=25)
CAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCAT < SRR4302533.983522/94‑1 (MQ=25)
CAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCAT < SRR4302533.1449507/94‑1 (MQ=25)
CAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCAT < SRR4302533.2399093/94‑1 (MQ=25)
AGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATT > SRR4302533.1384474/1‑94 (MQ=25)
AGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATT < SRR4302533.4115637/94‑1 (MQ=25)
GGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTG > SRR4302533.3674399/1‑94 (MQ=25)
GGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTG > SRR4302533.5398998/1‑94 (MQ=25)
GAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCC < SRR4302533.5375553/94‑1 (MQ=25)
ACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGG > SRR4302533.200977/1‑94 (MQ=25)
GTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGA < SRR4302533.3797055/94‑1 (MQ=25)
GGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCA < SRR4302533.5973263/94‑1 (MQ=25)
CGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAA > SRR4302533.5925690/1‑94 (MQ=25)
CGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAA < SRR4302533.820907/94‑1 (MQ=25)
GACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAAC < SRR4302533.1904696/94‑1 (MQ=25)
GACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAAC > SRR4302533.4390877/1‑94 (MQ=25)
GACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAAC < SRR4302533.2711874/94‑1 (MQ=25)
acgcCCTGTGTTAAATGAAGAACAGACACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACC < SRR4302533.156967/90‑1 (MQ=9)
ACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACC < SRR4302533.4273289/94‑1 (MQ=23)
ACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCG < SRR4302533.3118109/94‑1 (MQ=12)
CCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGGATAAGTGCCATTGCCCGGGAATTCAAAACGTCGC > SRR4302533.86631/1‑94 (MQ=9)
CCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCAAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGC < SRR4302533.299542/94‑1 (MQ=9)
CTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCG < SRR4302533.3912038/94‑1 (MQ=10)
TGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGG > SRR4302533.5490513/1‑94 (MQ=10)
TGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGG < SRR4302533.93741/94‑1 (MQ=10)
TGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGG > SRR4302533.1096347/1‑94 (MQ=10)
TGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGG > SRR4302533.870744/1‑94 (MQ=10)
AAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACC < SRR4302533.782367/94‑1 (MQ=10)
AATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCA < SRR4302533.1911718/94‑1 (MQ=10)
TGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATT < SRR4302533.6019770/94‑1 (MQ=10)
AAGAACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTT < SRR4302533.3153811/94‑1 (MQ=10)
ACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGA < SRR4302533.2986066/94‑1 (MQ=10)
ACAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGA > SRR4302533.5536870/1‑94 (MQ=10)
CAGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAG > SRR4302533.2225581/1‑94 (MQ=10)
AGAAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGC > SRR4302533.4256139/1‑94 (MQ=10)
AAACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCA > SRR4302533.4785176/1‑94 (MQ=10)
ACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCAAA < SRR4302533.1438177/94‑1 (MQ=10)
ACAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCAAA < SRR4302533.2293323/94‑1 (MQ=10)
CAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCAAAG < SRR4302533.4260366/94‑1 (MQ=10)
CAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCAAAG > SRR4302533.1468495/1‑94 (MQ=10)
CAGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCAAAG < SRR4302533.2456421/94‑1 (MQ=10)
AGGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCAAAGA > SRR4302533.478688/1‑94 (MQ=7)
GGCGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCAAGGCA < SRR4302533.2907744/94‑1 (MQ=4)
CGGTATTCGAGCGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCAAAGCAAA < SRR4302533.2932125/94‑1 (MQ=0)
CGGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCAAAGCAAA > SRR4302533.3459081/1‑94 (MQ=0)
GGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCAAAGCAAAA > SRR4302533.1502385/1‑94 (MQ=0)
GGTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCAAAGCAAAA < SRR4302533.503135/94‑1 (MQ=0)
GTATTCGAACGAATTAAGTCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCAAAGCAAAAC < SRR4302533.5715886/94‑1 (MQ=0)
GTATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCAAAGCAAAAC < SRR4302533.4243305/94‑1 (MQ=0)
ATTCGAACGAATTAAGTCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCAAAGCAAAACTT < SRR4302533.6239952/94‑1 (MQ=0)
ATTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCAAAGCAAAACTT > SRR4302533.5836797/1‑94 (MQ=0)
TTCGAACGAATTAAGTCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCAAAGCAAAACTTC < SRR4302533.2573113/94‑1 (MQ=0)
TTCGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCAAAGCAAAACTTC > SRR4302533.2153916/1‑94 (MQ=0)
TCGAACGAATTAAGTCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCAAAGCAAAACTTCA < SRR4302533.5939506/94‑1 (MQ=0)
CGAACGAATTAAGTCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCAAAGCAAAACTTCAG > SRR4302533.3989070/1‑94 (MQ=0)
CGAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCAAAGCAAAACTTCAG < SRR4302533.1076185/94‑1 (MQ=0)
GAACGAATTAAGTCAGGTGTAAGTATAAGTGCCTTTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCAAAGCAAAACTTCAGA > SRR4302533.4541398/1‑94 (MQ=0)
GAACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCAAAGCAAAACTTCAGA > SRR4302533.3161133/1‑94 (MQ=0)
AACGAATTAAGTCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCAAAGCAAAACTTCAGAC > SRR4302533.627317/1‑94 (MQ=0)
AACGAATTAAGTCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCAAAGCAAAACTTCAGAC < SRR4302533.5316183/94‑1 (MQ=0)
AACGAATTAAGCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCAAAGCAAAACTTCAGAC > SRR4302533.5789287/1‑94 (MQ=0)
GAATTAAGTCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCAAAGCAAAACTTCAGACACC > SRR4302533.3274545/1‑94 (MQ=0)
AATTAAGTCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCAAAGCAAAACTTCAGACACCT < SRR4302533.5007560/94‑1 (MQ=0)
AATTAAGTCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCAAAGCAAAACTTCAGACACCT > SRR4302533.2072540/1‑94 (MQ=0)
AATTAAGTCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCAAAGCAAAACTTCAGACACCT < SRR4302533.1402095/94‑1 (MQ=0)
AATTAAGTCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCAAAGCAAAACTTCAGACACCT < SRR4302533.5543337/94‑1 (MQ=0)
ATTAAGTCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCAAAGCAAAACTTCAGACACCTG > SRR4302533.704117/1‑94 (MQ=0)
ATTAAGTCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCAAAGCAAAACTTCAGACACCTG < SRR4302533.286754/94‑1 (MQ=0)
TTAAGTCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCAAAGCAAAACTTCAGACACCTGA < SRR4302533.1928868/94‑1 (MQ=0)
GCCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAACCCTCGCGGCAAACCATTTTAAGAGCCAAAGCAAAACTTCAGACACCTGACATA < SRR4302533.5803074/94‑1 (MQ=0)
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GGATAGTAAGAGCCCGCGGCGCAGGGAAACGTTTTGGTCGACCACCTGTGTTAAATGAAGAACAGAAACAGGCGGTATTCGAACGAATTAAGTCAGGTGTAAGTATAAGTGCCATTGCCCGGGAATTCAAAACCTCGCGGCAAACCATTTTAAGAGCCAAAGCAAAACTTCAGACACCTGACATA > NC_000913/1632049‑1632233
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
