Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F527 I0 R1
|
1651 |
322.4 |
10661268 |
95.2% |
10149527 |
150.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
CP009273 |
3,886,162 |
T→G |
8.6% |
L13R (CTG→CGG) |
yidZ → |
putative DNA‑binding transcriptional regulator |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP009273 | 3,886,162 | 0 | T | G | 8.6%
| 676.2
/ 54.5
| 253 | L13R (CTG→CGG) | yidZ | putative DNA‑binding transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (129/101); new base G (12/10); total (141/112) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 272 total aligned reads displayed.
GCGGTGGTTGGTATCGGCGCATGGAATATGCTGATCGGGATTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGCTCTTTGTGAACTCACCGCTGGGTCTGT > CP009273/3886013‑3886311
|
ggtggtTGGTATCGGCGCATGGAATATGCTGATCGGGATTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCtgctgc > 2:1863544/1‑150 (MQ=255)
tggttggtATCGGCGCATGGAATATGCTGATCGGGATTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCtt > 2:532080/1‑150 (MQ=255)
ttggtATCGGCGCATGGAATATGCTGATCGGGATTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCTCGCTTGATCTCAATCTGCTGCTTTGt < 1:20059/150‑1 (MQ=255)
tggtATCGGCGCATGGAATATGCTGATCGGGATTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTc > 1:1402258/1‑150 (MQ=255)
gtATCGGCGCATGGAATATGCTGATCGGGATTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTg > 1:4970441/1‑150 (MQ=255)
aTCGGCGCATGGAATATGCTGATCGGGATTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCa > 1:2113595/1‑150 (MQ=255)
aTCGGCGCATGGAATATGCTGATCGGGATTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCa < 2:679141/150‑1 (MQ=255)
ggCGCATGGAATATGCTGATCGGGATTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCt > 2:2198805/1‑144 (MQ=255)
cATGGAATATGCTGATCGGGATTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCGGCTTTGTCTGCAActgctg > 1:1689865/1‑150 (MQ=255)
aTGGAATATGCTGATCGGGATTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGa > 1:5120017/1‑150 (MQ=255)
gAATATGCTGATCGGGATTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGc < 1:2873396/150‑1 (MQ=255)
gAATATGCTGATCGGGATTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCGGCTTTGTCTGCAACTGCTGATGc > 2:4243600/1‑150 (MQ=255)
aaTATGCTGATCGGGATTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCGGCTTTGTCTGCAACTGCTGATGCa > 2:1978382/1‑150 (MQ=255)
tGCTGATCGGGATTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAg < 1:4800258/150‑1 (MQ=255)
tGCTGATCGGGATTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAg > 2:1150905/1‑150 (MQ=255)
tGATCGGGATTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAgcgc > 2:4360535/1‑150 (MQ=255)
gATCGGGATTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCGGCTTTGTCTGCAACTGCTGATGCAGGAGCGCa > 1:5321357/1‑150 (MQ=255)
gggATTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCGGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGt > 2:2155809/1‑150 (MQ=255)
gATTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTaa > 1:4382860/1‑150 (MQ=255)
aTTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAAc > 2:4945249/1‑150 (MQ=255)
aTTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAAc > 2:3872261/1‑150 (MQ=255)
aTTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAAc > 1:3302850/1‑150 (MQ=255)
tGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCaaa < 1:1852276/150‑1 (MQ=255)
aTTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAgc < 1:4029922/150‑1 (MQ=255)
ttGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAgcg > 2:2600192/1‑150 (MQ=255)
ttGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAgcg < 2:1549119/150‑1 (MQ=255)
tGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAgcgg < 1:4449220/150‑1 (MQ=255)
gCCTGTAGCAGAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCGGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAgcggc < 2:2572642/150‑1 (MQ=255)
tAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGc > 1:2500323/1‑150 (MQ=255)
aTAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCGGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGAt < 1:3462594/150‑1 (MQ=255)
aGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATaa > 1:4354803/1‑150 (MQ=255)
tGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAAc < 1:4577924/150‑1 (MQ=255)
gAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACg > 1:4304633/1‑150 (MQ=255)
gAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACg > 2:691785/1‑150 (MQ=255)
gAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCACATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACg < 1:2705846/150‑1 (MQ=255)
tGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCt < 1:3782208/150‑1 (MQ=255)
tGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCt < 1:1068661/150‑1 (MQ=255)
cTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTc > 1:767087/1‑150 (MQ=255)
tttttATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGTTCTCAATCTGCGGCTTTGTCTGCAACTGGTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTcg < 1:4179349/147‑1 (MQ=255)
tGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAATCGGCGAAGC‑GGATAAACGTGACACCTAcg > 1:3481224/1‑150 (MQ=255)
gATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTcgg > 1:3120902/1‑150 (MQ=255)
ttATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTcggcg > 1:2166696/1‑150 (MQ=255)
aTGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGt < 2:902347/150‑1 (MQ=255)
gTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGa < 2:3869337/150‑1 (MQ=255)
gTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGa > 2:4770291/1‑150 (MQ=255)
ttCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAg < 2:4638033/150‑1 (MQ=255)
tcgCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAg < 1:3244315/150‑1 (MQ=255)
cgcgCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGt > 1:5062999/1‑150 (MQ=255)
gcgcCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTc < 1:807815/150‑1 (MQ=255)
gcgcCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTc > 1:62228/1‑150 (MQ=255)
cgcCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCCATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCg < 1:13952/150‑1 (MQ=255)
cgcCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCg < 2:4446477/150‑1 (MQ=255)
cgcCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCg > 1:4091688/1‑150 (MQ=255)
ccTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCt < 2:3464320/150‑1 (MQ=255)
tGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTgg > 2:1214887/1‑150 (MQ=255)
ggACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGc > 2:862392/1‑150 (MQ=255)
gCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCCATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAg < 1:1616331/150‑1 (MQ=255)
gCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAg > 2:5059273/1‑150 (MQ=255)
ccccGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGt < 1:2513123/150‑1 (MQ=255)
cccGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGtt > 1:872009/1‑150 (MQ=255)
cccGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGtt > 2:2453257/1‑150 (MQ=255)
ttGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAaga < 1:4813686/150‑1 (MQ=255)
tGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAagag > 1:672897/1‑150 (MQ=255)
gCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGc < 1:3044018/150‑1 (MQ=255)
ccGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCCGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCg < 2:3684837/150‑1 (MQ=255)
cGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGt > 2:2338843/1‑150 (MQ=255)
cGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGt > 1:2844188/1‑150 (MQ=255)
cGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGt > 1:570856/1‑150 (MQ=255)
cTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTgg < 1:2561080/150‑1 (MQ=255)
tcttGAAGAAATACATCACCACGCTTGATCTCTATCTGCTGCTTTGTCTGGAACTGCTGTTGCAGGAGCGCAGCGTATCCAAAGCGGCGAAGC‑GGTTAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTTAGAGCGTGGt < 1:5242130/147‑1 (MQ=255)
tCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGt < 2:3182024/150‑1 (MQ=255)
cATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGtt > 1:1556285/1‑150 (MQ=255)
cATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGtt > 2:101720/1‑150 (MQ=255)
aTGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCACAGTTAAGAGCGTGGttt > 1:2452999/1‑150 (MQ=255)
aTGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGttt < 1:2933176/150‑1 (MQ=255)
tGAAGAAATCCATCACCACGCTTGATCTCATTCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTg < 2:162699/150‑1 (MQ=255)
tGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTg < 1:887018/150‑1 (MQ=255)
gaagaaATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTga < 2:1492243/150‑1 (MQ=255)
gaagaaATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTga < 1:1327637/150‑1 (MQ=255)
tCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCg < 2:4970441/150‑1 (MQ=255)
ccATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGc > 2:2861250/1‑150 (MQ=255)
cATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGct > 1:2321347/1‑150 (MQ=255)
caccacGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCACAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGCTCtt < 2:1986655/150‑1 (MQ=255)
caccacGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGCTCtt > 2:4709272/1‑150 (MQ=255)
ccacGCTTGATCTCAATCTGCGGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGCTCTTtg < 2:1689865/150‑1 (MQ=255)
cacGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGCTCTTtgt > 2:1126560/1‑150 (MQ=255)
acGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGACGCTGGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGCTCTTtgt < 2:1007457/150‑1 (MQ=255)
gCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGCTCTTTGTGaa < 2:2040618/150‑1 (MQ=255)
cTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGCTCTTTGTGAAc > 1:1142588/1‑150 (MQ=255)
ttGATCTCACTCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGCTCTTTGTGAACt < 2:3645813/150‑1 (MQ=255)
ttGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGCTCTTTGTGAACt < 2:3137005/150‑1 (MQ=255)
gATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGCTCTTTGTGAACTCa > 1:1534763/1‑150 (MQ=255)
tctcAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGCTCTTTGTGAACTCAcc < 1:3714117/150‑1 (MQ=255)
ctcAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGCTCTTTGTGAACTCACCg > 2:2675792/1‑150 (MQ=255)
ctcAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGCTCTTTGTGAACTCACCg > 2:480928/1‑150 (MQ=255)
aaTCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTCAGAGCGTGGTTTGACGACCCGCTCTTTGTGAACTCACCGCtc > 2:4127164/1‑149 (MQ=255)
ctgctTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGCTCTTTGTGAACTCACCGCTGGGTCTg > 2:1401264/1‑150 (MQ=255)
ctgctTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGCTCTTTGTGAACTCACCGCTGGGTCTg > 2:3281760/1‑150 (MQ=255)
ctgctTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGCTCTTTGTGAACTCACCGCTGGGTCTg > 2:3425546/1‑150 (MQ=255)
tgctTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGCTCTTTGTGAACTCACCGCTGGGTCTGt > 1:1460999/1‑150 (MQ=255)
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GCGGTGGTTGGTATCGGCGCATGGAATATGCTGATCGGGATTCTGATTGCCTGTAGCATAGTGAGCCTGTTGCTGATTATGTTCGTCGCGCCTGGACGCCCCGTTGCCGCTCATGAAGAAATCCATCACCACGCTTGATCTCAATCTGCTGCTTTGTCTGCAACTGCTGATGCAGGAGCGCAGCGTAACCAAAGCGGCGAAGC‑GGATAAACGTGACACCTTCGGCGGTGAGTAAGTCGCTGGCAAAGTTAAGAGCGTGGTTTGACGACCCGCTCTTTGTGAACTCACCGCTGGGTCTGT > CP009273/3886013‑3886311
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
