Philipp_Keller_2022: Ecoli_growing_on_methanol experiment stats

Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate	Flask count	Isolate count
0	1	1
1	33	33
2	34	34

ALE experiment mutation counts

Mutation Type	Unique	Observed
Single Base Substitutions	2867	17862
Multiple Base Substitutions	1	1
Deletions	17	169
Insertions	21	180
Mobile Element Insertions	6	77
Amplifications	39	114
Gene Conversions	0	0
Inversions	0	0
Total	2951	18403

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A0 F0 I1 R1	4	297.7	9763572	95.5%	9324211	150.0
A1 F0 I0 R1	81	326.4	10500568	93.1%	9776028	150.0
A1 F5 I0 R1	92	232.7	8849178	85.5%	7566047	149.0
A1 F10 I0 R1	85	228.3	8665814	85.8%	7435268	149.0
A1 F14 I0 R1	127	310.1	10402230	94.2%	9798900	149.0
A1 F17 I0 R1	93	279.2	9183790	95.6%	8779703	149.0
A1 F26 I0 R1	94	331.7	11075696	93.7%	10377927	150.0
A1 F42 I0 R1	87	324.4	10965648	95.0%	10417365	150.0
A1 F52 I0 R1	779	320.1	10410758	96.6%	10056792	149.0
A1 F54 I0 R1	640	319.5	10493376	95.3%	10000187	150.0
A1 F55 I0 R1	519	344.2	11360120	95.0%	10792114	150.0
A1 F56 I0 R1	543	285.0	9366284	95.7%	8963533	149.0
A1 F60 I0 R1	465	320.4	10502068	95.5%	10029474	149.0
A1 F78 I0 R1	626	241.3	10389380	77.7%	8072548	149.9
A1 F86 I0 R1	593	297.4	9515568	94.4%	8982696	150.0
A1 F98 I0 R1	799	294.1	9752082	92.2%	8991419	150.0
A1 F121 I0 R1	856	273.6	9081716	94.1%	8545894	150.0
A1 F142 I0 R1	859	274.6	8723680	96.4%	8409627	150.0
A1 F159 I0 R1	879	305.9	9588012	96.6%	9262019	150.0
A1 F181 I0 R1	1262	323.1	10297870	97.5%	10040423	150.0
A1 F202 I0 R1	1397	275.7	9089454	95.2%	8653160	150.0
A1 F204 I0 R1	1155	255.8	8356456	95.7%	7997128	150.0
A1 F218 I0 R1	1506	278.7	9275112	94.5%	8764980	150.0
A1 F224 I0 R1	1457	284.0	9290224	95.7%	8890744	150.0
A1 F247 I0 R1	1496	299.8	9582018	97.8%	9371213	149.0
A1 F309 I0 R1	1697	197.2	6627756	95.7%	6342762	147.9
A1 F342 I0 R1	1331	225.9	7641038	95.8%	7320114	147.9
A1 F361 I0 R1	1353	250.7	8230166	96.0%	7900959	148.9
A1 F368 I0 R1	1472	214.4	7116750	95.9%	6824963	147.9
A1 F394 I0 R1	1342	215.0	7134094	96.2%	6862998	147.9
A1 F434 I0 R1	1130	215.9	7031662	97.1%	6827743	147.9
A1 F488 I0 R1	1275	300.1	10328444	91.0%	9398884	150.0
A1 F527 I0 R1	1651	322.4	10661268	95.2%	10149527	150.0
A1 F534 I1 R1	1235	230.2	7611948	95.1%	7238962	150.0