TEE: TEE Ara experiment stats

Notes

Publication:

Deatherage, Daniel E., Jamie L. Kepner, Albert F. Bennett, Richard E. Lenski, and Jeffrey E. Barrick. 2017. “Specificity of Genome Evolution in Experimental Populations of Escherichia Coli Evolved at Different Temperatures.” Proceedings of the National Academy of Sciences of the United States of America 114 (10): E1904–12.

No resequencing data available.

ALE, flask, and isolate counts

ALE replicate	Flask count	Isolate count
0	1	1
1	1	3
2	1	3
3	1	3
4	1	3
5	1	3
6	6	16

ALE experiment mutation counts

Mutation Type	Unique	Observed
Single Base Substitutions	47	108
Multiple Base Substitutions	0	0
Deletions	14	29
Insertions	7	37
Mobile Element Insertions	15	30
Amplifications	4	4
Gene Conversions	0	0
Inversions	0	0
Total	87	208

ALE experiment functional change counts

Functional Change Type	Unique	Observed
Intergenic	13	28
Noncoding	0	0
Pseudogene	0	0
Synonymous	0	0
Nonsynonymous	0	0
Total	13	28

Mutation Needle Plot

Mutation Targets