CCK: tpi experiment stats

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Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate	Flask count	Isolate count
0	1	1
13	1	3
14	1	3
15	1	3
16	1	3
5	5	13

ALE experiment mutation counts

Mutation Type	Unique	Observed
Single Base Substitutions	31	86
Multiple Base Substitutions	0	0
Deletions	15	96
Insertions	13	44
Mobile Element Insertions	8	38
Amplifications	0	0
Gene Conversions	0	0
Inversions	0	0
Total	67	264

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Unassigned Missing Coverage Evidence	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A0 F0 I1 R1	11	0	96.7	1760281	96.3%	1695150	260.5
A13 F89 I0 R1	39	0	35.7	640324	98.8%	632640	259.5
A13 F89 I1 R1	19	0	48.3	1766720	89.2%	1575914	142.5
A13 F89 I2 R1	21	0	29.0	1055738	89.7%	946996	142.8
A14 F89 I0 R1	38	0	102.7	1772350	97.7%	1731585	268.3
A14 F89 I1 R1	17	0	20.1	773432	85.0%	657417	142.9
A14 F89 I2 R1	18	0	40.9	1468472	90.8%	1333372	142.7
A15 F88 I0 R1	37	0	118.4	2005136	97.6%	1957012	272.2
A15 F88 I1 R1	21	0	66.3	2378940	91.5%	2176730	142.0
A15 F88 I2 R1	20	0	48.0	1726984	91.3%	1576736	142.3
A16 F88 I0 R1	39	0	107.8	1851024	97.6%	1806599	265.6
A16 F88 I1 R1	20	0	49.9	1818516	89.6%	1629390	142.7
A16 F88 I2 R1	19	0	51.1	1872624	89.4%	1674125	142.3

Mutation Needle Plot

Mutation Targets