Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
0 2 2
23 1 2
69 1 2
71 1 2
94 1 2
5 6 10

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 55 209
Multiple Base Substitutions 0 0
Deletions 12 111
Insertions 6 21
Mobile Element Insertions 0 0
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 73 341

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F8 I1 R1 25 0 114.0 2452592 94.1% 2307889 219.3
A0 F13 I1 R1 28 0 131.7 2840326 93.9% 2667066 219.1
A23 F2000 I1 R1 34 0 165.3 3515406 94.0% 3304481 221.3
A23 F2000 I2 R1 38 0 125.7 2687438 94.1% 2528879 220.3
A69 F2000 I2 R1 32 0 130.0 2789900 93.6% 2611346 220.4
A69 F2000 I3 R1 36 0 84.1 1889666 90.2% 1704478 220.4
A71 F2000 I1 R1 29 0 128.1 2814310 92.8% 2611679 217.6
A71 F2000 I2 R1 33 0 144.3 3157378 93.5% 2952148 216.0
A94 F2000 I1 R1 44 0 147.7 3180684 93.5% 2973939 220.2
A94 F2000 I2 R1 42 0 124.0 2700938 94.0% 2538881 216.9

Mutation Needle Plot

Mutation Targets

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