Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
0 1 1
1 4 5
2 2 2
3 2 2
4 4 6
5 2 2
6 15 18

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 18 29
Multiple Base Substitutions 0 0
Deletions 4 7
Insertions 2 2
Mobile Element Insertions 10 16
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 34 54

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 10 0 92.1 3307530 90.7% 2999929 143.1
A1 F13 I1 R2 11 0 35.9 1540346 95.1% 1464869 120.8
A1 F16 I1 R1 12 0 47.8 1915362 96.3% 1844493 128.9
A1 F31 I1 R1 13 0 35.4 1381690 96.1% 1327804 130.7
A1 F66 I0 R1 73 0 91.9 3223286 98.4% 3171713 144.0
A1 F66 I1 R1 17 0 121.7 4437436 97.1% 4308750 141.0
A2 F8 I1 R1 13 0 34.4 1223644 96.4% 1179592 135.5
A2 F32 I1 R1 17 0 34.3 1374616 95.9% 1318256 128.3
A3 F17 I1 R1 14 0 46.4 1691090 97.0% 1640357 134.9
A3 F32 I1 R1 13 0 36.2 1403682 95.9% 1346131 125.2
A4 F8 I1 R1 10 0 34.3 1330464 96.7% 1286558 123.8
A4 F17 I1 R1 11 0 29.2 1108078 95.4% 1057106 137.5
A4 F17 I1 R2 12 0 35.9 1482066 95.7% 1418337 120.9
A4 F38 I1 R1 12 0 80.1 3163848 96.1% 3040457 139.0
A4 F68 I0 R1 95 0 78.5 3035206 97.9% 2971466 140.7
A4 F68 I1 R1 14 0 117.5 4066914 97.1% 3948973 141.0
A5 F22 I1 R2 13 0 33.1 1444658 95.8% 1383982 128.4
A5 F43 I1 R1 13 0 94.0 3334360 97.6% 3254335 138.9

Mutation Needle Plot

Mutation Targets

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