Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
23 4 5
24 3 5
2 7 10

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 11 36
Multiple Base Substitutions 0 0
Deletions 11 55
Insertions 4 21
Mobile Element Insertions 4 22
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 30 134

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A23 F0 I0 R1 20 0 203.6 4017998 92.9% 3732720 250.5
A23 F1 I0 R1 17 0 156.7 3154480 90.0% 2839032 251.4
A23 F148 I1 R1 14 0 45.7 1660340 90.3% 1499287 142.2
A23 F184 I0 R1 28 0 86.6 1465572 97.6% 1430398 267.8
A23 F184 I2 R1 13 0 42.0 1528396 89.7% 1370971 142.5
A24 F1 I0 R1 16 0 154.8 3171863 94.8% 3006926 240.5
A24 F2 I0 R1 18 0 39.7 777878 96.9% 753763 248.5
A24 F184 I0 R1 27 0 88.3 1534052 97.3% 1492632 261.3
A24 F184 I1 R1 14 0 40.6 1471776 90.4% 1330485 142.5
A24 F184 I2 R1 15 0 56.1 2030262 91.3% 1853629 141.1

Mutation Needle Plot

Mutation Targets

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