ALE, flask, and isolate counts
| ALE replicate |
Flask count |
Isolate count |
| 1 |
1 |
1 |
| 2 |
1 |
1 |
| 3 |
1 |
1 |
| 4 |
1 |
1 |
| 5 |
1 |
1 |
| 6 |
1 |
1 |
| 6 |
6 |
6 |
ALE experiment mutation counts
| Mutation Type |
Unique |
Observed |
| Single Base Substitutions |
16 |
73 |
| Multiple Base Substitutions |
0 |
0 |
| Deletions |
5 |
29 |
| Insertions |
2 |
12 |
| Mobile Element Insertions |
2 |
2 |
| Amplifications |
0 |
0 |
| Gene Conversions |
0 |
0 |
| Inversions |
0 |
0 |
| Total |
25 |
116 |
Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Unassigned Missing Coverage Evidence |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F16 I0 R1
|
23 |
0 |
134.0 |
6354118 |
99.0% |
6290576 |
99.0 |
|
A2 F16 I0 R1
|
25 |
0 |
107.5 |
5094252 |
98.9% |
5038215 |
99.0 |
|
A3 F16 I0 R1
|
25 |
0 |
129.1 |
6124574 |
98.9% |
6057203 |
99.0 |
|
A4 F16 I0 R1
|
25 |
0 |
146.7 |
6951148 |
98.9% |
6874685 |
99.0 |
|
A5 F16 I0 R1
|
23 |
0 |
136.9 |
6457812 |
99.3% |
6412607 |
99.0 |
|
A6 F16 I0 R1
|
23 |
0 |
120.5 |
5660156 |
99.6% |
5637515 |
99.0 |
Mutation Needle Plot