Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
1 2 7
3 1 2
4 1 2
7 1 2
9 1 2
5 6 15

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 6 19
Multiple Base Substitutions 0 0
Deletions 7 68
Insertions 3 32
Mobile Element Insertions 1 2
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 17 121

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F8 I1 R1 8 0 72.9 2353418 97.7% 2299289 148.2
A1 F8 I1 R1 8 0 72.9 2353418 97.7% 2299289 148.2
A1 F8 I2 R1 7 0 49.3 1723470 94.7% 1632126 140.4
A1 F8 I2 R1 7 0 49.3 1723470 94.7% 1632126 140.4
A1 F28 I1 R1 7 0 105.8 3545036 94.0% 3332333 148.5
A1 F28 I2 R1 8 0 58.0 2028170 94.9% 1924733 140.0
A1 F28 I2 R1 8 0 58.0 2028170 94.9% 1924733 140.0
A3 F28 I1 R1 10 0 112.7 3744108 95.5% 3575623 148.7
A3 F28 I1 R1 10 0 112.7 3744108 95.5% 3575623 148.7
A4 F13 I1 R1 8 0 45.3 1560100 95.1% 1483655 141.7
A4 F13 I1 R1 8 0 45.3 1560100 95.1% 1483655 141.7
A7 F9 I1 R1 8 0 100.3 3308024 95.8% 3169086 148.1
A7 F9 I1 R1 8 0 100.3 3308024 95.8% 3169086 148.1
A9 F14 I1 R1 8 0 53.1 1833920 94.7% 1736722 142.3
A9 F14 I1 R1 8 0 53.1 1833920 94.7% 1736722 142.3

Mutation Needle Plot

Mutation Targets

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