Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
0 1 1
13 2 3
14 2 3
15 2 3
16 2 3
17 2 3
18 2 3
7 13 19

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 40 72
Multiple Base Substitutions 0 0
Deletions 5 22
Insertions 0 0
Mobile Element Insertions 3 3
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 48 97

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 6 0 45.9 1723262 97.5% 1680180 128.1
A13 F18 I1 R1 9 0 82.3 3070604 97.5% 2993838 128.6
A13 F114 I0 R1 75 0 39.8 1495950 97.6% 1460047 128.2
A13 F114 I6 R1 12 0 57.6 2133514 97.6% 2082309 129.2
A14 F18 I1 R1 7 0 55.3 2167564 97.5% 2113374 128.7
A14 F113 I0 R1 93 0 63.1 2345894 97.5% 2287246 129.0
A14 F113 I3 R1 12 0 75.3 2803720 97.7% 2739234 128.5
A15 F18 I1 R1 9 0 61.8 2296116 97.6% 2241009 129.0
A15 F109 I0 R1 75 0 58.6 2206950 97.5% 2151776 128.0
A15 F109 I1 R1 10 0 92.1 3414904 97.6% 3332946 129.0
A16 F19 I1 R1 8 0 64.7 2423318 97.3% 2357888 128.4
A16 F113 I0 R1 69 0 63.5 2391654 97.3% 2327079 128.2
A16 F113 I3 R1 13 0 49.2 1828114 97.4% 1780583 129.2
A17 F19 I1 R1 9 0 56.2 2097716 97.7% 2049468 128.8
A17 F116 I0 R1 71 0 56.5 2118224 97.6% 2067386 128.4
A17 F116 I2 R1 14 0 62.0 2301876 97.6% 2246630 128.8
A18 F18 I1 R1 9 0 57.4 2258518 97.6% 2204313 128.9
A18 F110 I0 R1 79 0 72.0 2675398 97.6% 2611188 129.3
A18 F110 I3 R1 11 0 47.5 1767202 97.6% 1724789 128.7

Mutation Needle Plot

Mutation Targets

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