Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
1 2 8
1 2 8

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 772 5492
Multiple Base Substitutions 10 38
Deletions 45 314
Insertions 63 458
Mobile Element Insertions 0 0
Amplifications 14 16
Gene Conversions 0 0
Inversions 0 0
Total 904 6318

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F21 I1 R1 782 0 581.3 19111616 98.4% 18805830 139.1
A1 F21 I1 R2 777 0 572.4 18918554 98.5% 18634775 138.3
A1 F21 I1 R3 778 0 586.6 19747158 98.0% 19352214 137.9
A1 F21 I1 R5 781 0 658.8 22969755 98.0% 22510359 137.9
A1 F21 I1 R6 776 0 393.9 12922803 98.2% 12690192 138.8
A1 F50 I1 R1 775 0 316.5 10245680 97.2% 9958800 138.8
A1 F50 I1 R2 870 0 341.9 11209456 97.2% 10895591 138.9
A1 F50 I1 R3 779 0 308.9 10220750 96.7% 9883465 138.9

Mutation Needle Plot

Mutation Targets

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