Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
2 1 2
4 1 2
6 1 2
8 1 2
10 1 2
5 5 10

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 42 288
Multiple Base Substitutions 9 66
Deletions 24 193
Insertions 19 154
Mobile Element Insertions 0 0
Amplifications 78 89
Gene Conversions 0 0
Inversions 0 0
Total 172 790

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A2 F3 I1 R1 83 0 612.0 27719550 98.5% 27303756 136.9
A2 F3 I3 R1 74 0 1476.6 95236651 98.9% 94189047 99.6
A4 F3 I1 R1 80 0 278.8 12632442 98.2% 12405058 137.0
A4 F3 I2 R1 74 0 1703.2 102366877 99.0% 101343208 100.5
A6 F3 I1 R1 72 0 1533.9 96324995 99.0% 95361745 99.4
A6 F3 I2 R1 82 0 286.9 13776176 98.3% 13541981 137.0
A8 F7 I1 R1 102 0 321.2 14943620 98.4% 14704522 137.1
A8 F7 I2 R1 68 0 55.0 2739440 97.7% 2676432 138.9
A10 F3 I1 R1 74 0 2784.9 170036943 99.0% 168336573 99.9
A10 F3 I2 R1 81 0 413.6 18886876 98.3% 18565799 137.0

Mutation Needle Plot

Mutation Targets

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