Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
0 1 1
1 2 2
2 2 2
3 2 2
4 1 1
5 1 1
6 9 9

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 40 276
Multiple Base Substitutions 7 62
Deletions 9 27
Insertions 17 137
Mobile Element Insertions 0 0
Amplifications 10 11
Gene Conversions 0 0
Inversions 0 0
Total 83 513

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 52 0 69.5 2964196 98.4% 2916768 145.9
A1 F11 I1 R1 56 0 91.5 3907174 98.4% 3844659 146.2
A1 F42 I1 R1 60 0 69.9 3000528 98.3% 2949519 146.4
A2 F12 I1 R1 58 0 76.7 3263832 98.3% 3208346 146.5
A2 F43 I1 R1 60 0 76.0 3234326 98.3% 3179342 146.8
A3 F11 I1 R1 56 0 79.5 3383150 98.4% 3329019 146.6
A3 F48 I1 R1 58 0 71.3 3054194 98.3% 3002272 146.3
A4 F18 I1 R1 54 0 68.8 3145800 98.6% 3101758 145.5
A5 F18 I1 R1 59 0 77.7 3515218 98.5% 3462489 145.9

Mutation Needle Plot

Mutation Targets

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