ALE, flask, and isolate counts
| ALE replicate |
Flask count |
Isolate count |
| 0 |
1 |
1 |
| 1 |
3 |
3 |
| 2 |
1 |
1 |
| 3 |
2 |
2 |
| 4 |
2 |
2 |
| 5 |
2 |
2 |
| 6 |
2 |
2 |
| 7 |
13 |
13 |
ALE experiment mutation counts
| Mutation Type |
Unique |
Observed |
| Single Base Substitutions |
17 |
30 |
| Multiple Base Substitutions |
0 |
0 |
| Deletions |
7 |
13 |
| Insertions |
5 |
5 |
| Mobile Element Insertions |
5 |
5 |
| Amplifications |
0 |
0 |
| Gene Conversions |
0 |
0 |
| Inversions |
0 |
0 |
| Total |
34 |
53 |
Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Unassigned Missing Coverage Evidence |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A0 F0 I1 R1
|
4 |
2 |
422.4 |
11956043 |
98.9% |
11824526 |
164.0 |
|
A1 F58 I1 R1
|
7 |
4 |
187.5 |
3872321 |
94.7% |
3667087 |
237.7 |
|
A1 F133 I1 R1
|
8 |
3 |
77.8 |
1665675 |
96.6% |
1609042 |
225.9 |
|
A1 F134 I1 R1
|
17 |
3 |
223.7 |
4650740 |
96.5% |
4487964 |
225.5 |
|
A2 F58 I1 R1
|
8 |
4 |
138.6 |
2901453 |
94.2% |
2733168 |
234.0 |
|
A3 F57 I1 R1
|
8 |
3 |
149.3 |
3168033 |
92.5% |
2930430 |
235.1 |
|
A3 F133 I1 R1
|
8 |
3 |
228.9 |
4911662 |
95.3% |
4680813 |
224.7 |
|
A4 F59 I1 R1
|
8 |
2 |
174.3 |
3614805 |
95.1% |
3437679 |
233.7 |
|
A4 F135 I1 R1
|
10 |
3 |
172.9 |
3838759 |
95.1% |
3650659 |
216.0 |
|
A5 F54 I1 R1
|
7 |
2 |
102.2 |
2130574 |
92.3% |
1966519 |
237.7 |
|
A5 F135 I1 R1
|
9 |
3 |
249.2 |
5114451 |
96.1% |
4914987 |
230.2 |
|
A6 F58 I1 R1
|
8 |
2 |
104.0 |
2222166 |
92.1% |
2046614 |
236.4 |
|
A6 F133 I1 R1
|
14 |
4 |
151.8 |
3066412 |
96.5% |
2959087 |
232.6 |
Mutation Needle Plot
