ALE, flask, and isolate counts
| ALE replicate |
Flask count |
Isolate count |
| 1 |
1 |
1 |
| 2 |
1 |
1 |
| 3 |
1 |
1 |
| 4 |
1 |
1 |
| 4 |
4 |
4 |
ALE experiment mutation counts
| Mutation Type |
Unique |
Observed |
| Single Base Substitutions |
31 |
31 |
| Multiple Base Substitutions |
0 |
0 |
| Deletions |
11 |
21 |
| Insertions |
7 |
13 |
| Mobile Element Insertions |
1 |
3 |
| Amplifications |
0 |
0 |
| Gene Conversions |
0 |
0 |
| Inversions |
0 |
0 |
| Total |
50 |
68 |
Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Unassigned Missing Coverage Evidence |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F20 I1 R1
|
8 |
0 |
118.3 |
3916115 |
99.5% |
3896534 |
150.1 |
|
A2 F20 I1 R1
|
11 |
0 |
106.0 |
3137506 |
99.4% |
3118680 |
154.1 |
|
A3 F20 I1 R1
|
9 |
0 |
82.3 |
2557412 |
98.3% |
2513935 |
149.6 |
|
A4 F20 I1 R1
|
40 |
0 |
94.2 |
2922482 |
99.2% |
2899102 |
152.9 |
Mutation Needle Plot
