CCK: CCK tpi experiment stats

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Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate	Flask count	Isolate count
0	1	1
13	1	3
14	1	3
15	1	3
16	1	3
5	5	13

ALE experiment mutation counts

Mutation Type	Unique	Observed
Single Base Substitutions	35	91
Multiple Base Substitutions	0	0
Deletions	13	82
Insertions	6	19
Mobile Element Insertions	0	0
Amplifications	0	0
Gene Conversions	0	0
Inversions	0	0
Total	54	192

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Unassigned Missing Coverage Evidence	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A0 F0 I1 R1	43	0	98.5	1760281	98.1%	1726835	260.5
A13 F89 I0 R1	40	0	35.8	640324	99.2%	635201	259.5
A13 F89 I1 R1	13	0	50.4	1766720	93.5%	1651883	142.5
A13 F89 I2 R1	14	0	30.2	1055738	93.8%	990282	142.8
A14 F89 I0 R1	69	0	103.5	1772350	98.4%	1743992	268.3
A14 F89 I1 R1	12	0	21.3	773432	90.4%	699182	142.9
A14 F89 I2 R1	13	0	42.5	1468472	94.5%	1387706	142.7
A15 F88 I0 R1	61	0	119.5	2005136	98.4%	1973053	272.2
A15 F88 I1 R1	15	0	68.5	2378940	94.9%	2257614	142.0
A15 F88 I2 R1	14	0	49.8	1726984	94.8%	1637180	142.3
A16 F88 I0 R1	67	0	108.8	1851024	98.5%	1823258	265.6
A16 F88 I1 R1	13	0	52.1	1818516	93.8%	1705768	142.7
A16 F88 I2 R1	13	0	53.4	1872624	93.6%	1752776	142.3

Mutation Needle Plot

Mutation Targets