AUX2: AUX2 hisD gltB - Experiment Stats
Stats |
Metadata |
Mutations |
Converged Mutations |
Fixed Mutations |
Filter
Notes
ALE, flask, and isolate counts
| ALE replicate | Flask count | Isolate count |
|---|---|---|
| 7 | 1 | 3 |
| 8 | 1 | 1 |
| 9 | 1 | 3 |
| 11 | 1 | 3 |
| 12 | 1 | 3 |
| 5 | 5 | 13 |
ALE experiment mutation counts
| Mutation Type | Unique | Observed |
|---|---|---|
| Single Base Substitutions | 74 | 120 |
| Multiple Base Substitutions | 1 | 1 |
| Deletions | 5 | 7 |
| Insertions | 5 | 10 |
| Mobile Element Insertions | 2 | 17 |
| Amplifications | 0 | 0 |
| Gene Conversions | 0 | 0 |
| Inversions | 0 | 0 |
| Total | 87 | 155 |
Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate | Predicted Mutations | Unassigned Missing Coverage Evidence | Mean Coverage | Total Reads | Percent Mapped | Mapped Reads | Average Read Length |
|---|---|---|---|---|---|---|---|
| A7 F15 I0 R1 | 19 | 0 | 30.8 | 1009140 | 98.2% | 990975 | 146.1 |
| A7 F15 I30 R1 | 15 | 0 | 55.7 | 1983452 | 96.1% | 1906097 | 146.6 |
| A7 F15 I40 R1 | 5 | 0 | 67.3 | 2204670 | 98.1% | 2162781 | 147.6 |
| A8 F31 I0 R1 | 21 | 0 | 20.8 | 679660 | 96.2% | 653832 | 148.9 |
| A9 F14 I0 R1 | 10 | 0 | 15.2 | 500670 | 97.9% | 490155 | 148.1 |
| A9 F14 I30 R1 | 4 | 0 | 87.3 | 2895478 | 96.1% | 2782554 | 146.1 |
| A9 F14 I40 R1 | 9 | 0 | 116.4 | 3745552 | 96.7% | 3621948 | 149.0 |
| A11 F28 I0 R1 | 22 | 0 | 22.8 | 756742 | 98.3% | 743877 | 146.6 |
| A11 F28 I30 R1 | 10 | 0 | 81.7 | 2624466 | 97.7% | 2564103 | 148.5 |
| A11 F28 I40 R1 | 10 | 0 | 120.9 | 3875909 | 97.5% | 3779011 | 149.0 |
| A12 F16 I0 R1 | 15 | 0 | 22.2 | 719402 | 96.1% | 691345 | 149.9 |
| A12 F16 I30 R1 | 10 | 0 | 70.3 | 2287316 | 96.6% | 2209547 | 148.9 |
| A12 F16 I40 R1 | 5 | 0 | 62.8 | 2074054 | 95.8% | 1986943 | 147.3 |