Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
4 2 2
5 3 4
6 3 4
3 8 10

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 21 54
Multiple Base Substitutions 0 0
Deletions 6 26
Insertions 2 3
Mobile Element Insertions 2 2
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 31 85

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F32 I1 R1 8 0 94.4 3089734 95.3% 2944516 148.7
A4 F108 I0 R1 923 0 75.4 2440050 96.2% 2347328 148.9
A5 F31 I1 R1 10 0 83.7 2708924 96.5% 2614111 148.9
A5 F65 I1 R1 11 0 93.2 3008820 96.7% 2909528 148.9
A5 F105 I0 R1 1288 0 109.2 3547880 95.9% 3402416 148.9
A5 F105 I1 R1 13 0 156.0 5108104 95.4% 4873131 148.7
A6 F31 I1 R1 11 0 155.2 5089904 95.2% 4845588 148.7
A6 F65 I1 R1 15 0 137.6 4487644 95.6% 4290187 148.8
A6 F108 I0 R1 889 0 70.1 2273064 96.2% 2186687 148.9
A6 F108 I1 R1 14 0 112.8 3657430 96.2% 3518447 148.9

Mutation Needle Plot

Mutation Targets

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