Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
0 1 1
1 1 1
2 1 1
3 1 1
4 1 1
5 1 1
6 1 1
7 7 7

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 60 391
Multiple Base Substitutions 4843 33901
Deletions 34 196
Insertions 2 8
Mobile Element Insertions 0 0
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 4939 34496

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 0 296.4 4517418 96.8% 4372860 264.2
A1 F210 I1 R1 4928 0 385.2 6658600 97.5% 6492135 231.0
A2 F210 I1 R1 4928 0 368.7 6392010 97.5% 6232209 231.9
A3 F210 I1 R1 4927 0 250.2 4002508 96.7% 3870425 266.6
A4 F210 I1 R1 4930 0 262.8 3829204 96.6% 3699011 272.9
A5 F210 I1 R1 4929 0 268.4 3907572 96.3% 3762991 273.2
A6 F210 I1 R1 4928 0 340.1 5480506 96.9% 5310610 252.0

Mutation Needle Plot

Mutation Targets

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