Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | AE015451 | 336,125 | +T | coding (210/237 nt) | PP_0278 → | conserved protein of unknown function |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | AE015451 | 336,124 | 1 | . | T | 99.2% | 426.3 / NA | 130 | D70V (GAT→GTT) | PP_0278 | conserved protein of unknown function |
Reads supporting (aligned to +/- strand): ref base . (0/1); major base T (31/97); minor base G (0/1); total (31/99) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 140 total aligned reads displayed.
GCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GA‑TACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTG > AE015451/336001‑336239 | gcgTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑Ga < 2:288949/124‑1 (MQ=255) gTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GA‑t > 2:289149/1‑123 (MQ=255) gagCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GA‑tta > 1:289119/1‑120 (MQ=255) agCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GA‑ttacct < 2:288953/124‑6 (MQ=255) agCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GA‑tta < 1:288954/121‑3 (MQ=255) gCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GA‑ttacct > 2:289138/1‑118 (MQ=255) cccGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGCGGACGACCATAAATTCCTGGGGGCAGCC‑GA‑tt < 2:288956/118‑2 (MQ=255) cccGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCtgt < 1:288955/124‑1 (MQ=255) cccGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCtg < 1:288957/123‑1 (MQ=255) gCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCACGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑Ga > 1:289141/1‑112 (MQ=255) cGTCCCGGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGa < 2:288960/123‑1 (MQ=255) cccGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACa < 1:288963/121‑1 (MQ=255) ccGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATgtc < 2:288965/124‑3 (MQ=255) ccGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGc < 1:288964/124‑1 (MQ=255) gTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGcc > 1:289152/1‑123 (MQ=255) gTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCa < 2:288966/124‑1 (MQ=255) gcgGCCTACGCGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAgg < 2:288969/121‑1 (MQ=255) gcgGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGgcgc < 2:288970/124‑1 (MQ=255) cgGCCTACGGGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGa < 1:288973/109‑1 (MQ=255) cgGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCa < 2:288972/117‑1 (MQ=255) cgGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCt < 1:288971/124‑1 (MQ=255) ggCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCt < 1:288974/123‑1 (MQ=255) ccTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCtgat < 2:288976/124‑1 (MQ=255) cTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCtgatg < 1:288979/124‑1 (MQ=255) cTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATCGATGAAGACCATAAGTTCCTGAGGGCAGCC‑GATTACCTGTGCGATTTGGCCAAGGCGCtgatg < 1:288980/124‑1 (MQ=255) cGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAAc > 1:289169/1‑124 (MQ=255) gAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATgg < 2:288982/106‑1 (MQ=255) gAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACg > 1:289094/1‑124 (MQ=255) aGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGa < 1:288983/124‑1 (MQ=255) cATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACTATAAATTCCTGGGGGCAGCC‑GATTACTTGTGCGACATGGCCAAGGCGCTGATGAACGata < 1:288986/124‑1 (MQ=255) cATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGata < 2:288987/124‑1 (MQ=255) cATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGat < 2:288985/123‑1 (MQ=255) aTGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGa < 2:288988/121‑1 (MQ=255) gTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATc < 1:288989/123‑1 (MQ=255) gTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATc < 2:288991/123‑1 (MQ=255) gTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGAGATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAgg < 2:288992/106‑1 (MQ=255) tcGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGatat < 2:288995/119‑1 (MQ=255) gATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAt < 1:288996/123‑1 (MQ=255) aTCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAt > 2:289093/1‑122 (MQ=255) tCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGc > 1:289148/1‑124 (MQ=255) ccTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCgaga < 2:288998/119‑1 (MQ=255) ccTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAt < 2:288997/120‑1 (MQ=255) cTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCa < 1:289000/124‑1 (MQ=255) tGATGGTCTACATCAAGCACCTGTTGCGCGAGGGCGAGATGGAGGACGACCATAAATTCCTGGGGGCAGCCGGT‑TACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATc < 2:289001/119‑1 (MQ=255) tGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATGTGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCaa < 2:289002/124‑1 (MQ=255) tGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGGTATCGAGATCGcc > 2:289117/1‑119 (MQ=255) gggCTACATCGAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGt < 1:289004/124‑1 (MQ=255) ggCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGt > 2:289183/1‑123 (MQ=255) ggCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATAAACGATTTCGAGATCGCCAAggat > 2:289248/1‑121 (MQ=255) gCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTaa < 1:289007/124‑1 (MQ=255) gCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTaa < 1:289006/124‑1 (MQ=255) tACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAgg < 2:289008/124‑1 (MQ=255) cATCAAGCACCTGGTGCGCGAGCGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAAATCGCCAAGGGTAAGgcg < 2:289010/124‑1 (MQ=255) aTCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGgcgc < 2:289012/124‑1 (MQ=255) aTCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GAGTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGgcgc < 1:289011/124‑1 (MQ=255) cAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCa < 1:289013/123‑1 (MQ=255) aaGCACCGGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCAt < 2:289015/123‑1 (MQ=255) aGCACCTGGTGCGCGAGGGCGATATTGAGGACGACCATAAATTCCTGGGGGCATCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTa < 1:289017/124‑1 (MQ=255) cACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAg < 2:289018/123‑1 (MQ=255) aCCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGc < 1:289019/124‑1 (MQ=255) ccTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGc < 1:289020/123‑1 (MQ=255) ccTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGc > 1:289415/1‑123 (MQ=255) cTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCa < 1:289022/123‑1 (MQ=255) ggTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACATGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGCGTAACGCGCATTAGGCa < 1:289023/121‑1 (MQ=255) cgcgAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTa < 2:289028/103‑1 (MQ=255) cgcgAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGAcgc > 2:289161/1‑124 (MQ=255) cgcgAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGAcgc < 2:289027/124‑1 (MQ=255) cgcgAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGAcgc < 2:289026/124‑1 (MQ=255) cgAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGAcgcg < 1:289030/123‑1 (MQ=255) cgAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGAcgcg < 2:289031/123‑1 (MQ=255) cgAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCgg < 1:289032/124‑1 (MQ=255) aGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCgg < 1:289033/122‑1 (MQ=255) aGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGt > 2:289207/1‑123 (MQ=255) aGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTc > 1:289042/1‑124 (MQ=255) gCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCa > 1:289165/1‑122 (MQ=255) gCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCAtt < 1:289035/124‑1 (MQ=255) cGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCAttt < 2:289036/124‑1 (MQ=255) atatGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCAttt > 1:289236/1‑122 (MQ=255) gaggaCGACCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAg < 1:289038/124‑1 (MQ=255) gacgacCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCgg > 2:289189/1‑124 (MQ=255) gacgacCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCg < 1:289040/123‑1 (MQ=255) acgacCATAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGt < 1:289041/108‑1 (MQ=255) aTAAATTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCg < 2:289042/124‑1 (MQ=255) aaaTTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTc < 2:289044/124‑1 (MQ=255) aaTTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGt < 1:289045/122‑1 (MQ=255) aaTTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTcg < 2:289046/124‑1 (MQ=255) aTTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCTAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTcgc > 2:289150/1‑124 (MQ=255) aTTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTcgc > 1:289201/1‑124 (MQ=255) aTTCCTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTcgc < 1:289047/124‑1 (MQ=255) ccTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGt < 2:289049/118‑1 (MQ=255) cTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGaa < 1:289050/123‑1 (MQ=255) cTGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAAt < 2:289051/124‑1 (MQ=255) tGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGaa < 2:289054/122‑1 (MQ=255) tGGGGGCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATg < 2:289053/124‑1 (MQ=255) ggggCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGaa > 2:289166/1‑120 (MQ=255) ggggCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATggg < 1:289056/124‑1 (MQ=255) ggggCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATgg < 2:289055/123‑1 (MQ=255) ggggCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATgg < 1:289057/123‑1 (MQ=255) ggCAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATgg > 1:289184/1‑121 (MQ=255) cAGCC‑GATTACCTGTGCGACATGGCCAAGGCGCTGATGTACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTg > 2:289192/1‑123 (MQ=255) | GCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCC‑GA‑TACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTG > AE015451/336001‑336239 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |