BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	AE015451	2,328,326	C→T	M1M (ATG→ATA) †	PP_2046 ←	Transcriptional regulator, LysR family

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	AE015451	2,328,326	0	C	T	100.0%	1068.5 / NA	379	M1M (ATG→ATA) †	PP_2046	Transcriptional regulator, LysR family
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (195/184); total (195/184)

Only 100 of 385 total aligned reads displayed.

TCGGCTGGGTCAGGGCCAGACGCTCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGCATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTCCCTTCCCGATCAATCAGGTGGCTGT  >  AE015451/2328205‑2328447

tCGGCTGGGTCAGGGCCAGACGCTCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGtata                                                                                                                        <  1:3099280/125‑1 (MQ=255)

 cGGCTGGGTCAGGGCCAGACGCTCGGCGGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTAt                                                                                                                         <  1:3099284/123‑1 (MQ=255)

  ggCTGGGTCAGGGCCAGACGCTCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATAc                                                                                                                       <  2:3099288/124‑1 (MQ=255)

   gCTGGGTCAGGGCCAGACGCTCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGa                                                                                                                     >  2:3099640/1‑125 (MQ=255)

    cTGGGTCAGGGCCAGACGCTCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGaa                                                                                                                    <  1:3099291/125‑1 (MQ=255)

      gggTCAGGGCCAGACGCTCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAAt                                                                                                                  <  2:3099296/125‑1 (MQ=255)

        gTCAGGGCCAGACGCTCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATgg                                                                                                                <  1:3099301/125‑1 (MQ=255)

          cAGGGCCAGACGCTCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGaa                                                                                                              <  2:3099303/125‑1 (MQ=255)

            gggCCAGACGCTCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGaaa                                                                                                             <  2:3099308/124‑1 (MQ=255)

             ggCCAGACGCTCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAAtt                                                                                                           <  1:3099316/125‑1 (MQ=255)

              gCCAGACGCTCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAAttt                                                                                                          >  1:3099421/1‑125 (MQ=255)

                cAGACGCTCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTc                                                                                                         <  1:3099321/124‑1 (MQ=255)

                cAGACGCTCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCa                                                                                                        <  2:3099319/125‑1 (MQ=255)

                  gACGCTCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCaaa                                                                                                      >  2:3099527/1‑125 (MQ=255)

                    cGCTCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCaaaaa                                                                                                    <  1:3099326/125‑1 (MQ=255)

                    cGCTCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCaaaaa                                                                                                    <  1:3099329/125‑1 (MQ=255)

                       tCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATAc                                                                                                 <  2:3099334/125‑1 (MQ=255)

                        cGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATAcc                                                                                                <  1:3099339/125‑1 (MQ=255)

                        cGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATAc                                                                                                 >  1:3099647/1‑124 (MQ=255)

                         ggCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGGAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAAtt                                                                                                           <  2:3099346/113‑1 (MQ=255)

                         ggCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCt                                                                                               <  2:3099341/125‑1 (MQ=255)

                          gCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCtt                                                                                              <  1:3099350/125‑1 (MQ=255)

                           cTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTc                                                                                             >  1:3099814/1‑125 (MQ=255)

                             gCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTc                                                                                             <  2:3099355/123‑1 (MQ=255)

                             gCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCgg                                                                                           <  1:3099356/125‑1 (MQ=255)

                              cccGGGATACTTTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCgg                                                                                           >  2:3099782/1‑124 (MQ=255)

                               ccGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGcc                                                                                         <  2:3099363/125‑1 (MQ=255)

                                cGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGc                                                                                          >  1:3099620/1‑123 (MQ=255)

                                cGGGATACATTCTCTTCACGCAGCAACATGTCGAAGACGCGCAGCACGTTCAGGTCGAAGTTCGAGATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGc                                                                                          <  1:3099364/123‑1 (MQ=255)

                                  ggATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCt                                                                                        >  1:3099634/1‑123 (MQ=255)

                                  ggATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGc                                                                                      >  1:3099711/1‑125 (MQ=255)

                                   gATACATTGTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACGTTCGGc                                                                                          >  2:3100045/1‑120 (MQ=255)

                                   gATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCt                                                                                     <  1:3099371/125‑1 (MQ=255)

                                   gATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCt                                                                                     >  1:3099574/1‑125 (MQ=255)

                                   gATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCt                                                                                     <  2:3099372/125‑1 (MQ=255)

                                    aTACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCtt                                                                                    >  2:3099596/1‑125 (MQ=255)

                                    aTACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCtt                                                                                    >  1:3099824/1‑125 (MQ=255)

                                     tACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCtt                                                                                    >  2:3099971/1‑124 (MQ=255)

                                         ttCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGt                                                                               >  2:3099409/1‑125 (MQ=255)

                                            tGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAGATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGa                                                                             <  2:3099378/124‑1 (MQ=255)

                                               tCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATcac                                                                         <  1:3099384/125‑1 (MQ=255)

                                                 aCGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAACATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATcac                                                                         >  1:3099663/1‑123 (MQ=255)

                                                 aCGCAGCAACATGTCGAAGACGCGAAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCtt                                                                                    <  2:3099385/112‑1 (MQ=255)

                                                  cGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGCAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATAc                                                                                                 >  1:3100278/1‑98 (MQ=255)

                                                  cGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATcaca                                                                        <  1:3099388/123‑1 (MQ=255)

                                                      gcaACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCt                                                                   <  2:3099393/124‑1 (MQ=255)

                                                      gcaACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCATCGGCCTGCTTAGGGTGATCACAGTCCTc                                                                  >  2:3099657/1‑125 (MQ=255)

                                                       caACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGCAAATATATGGTATACGAAATGGAAATTTCaaaa                                                                                                     >  2:3099852/1‑89 (MQ=255)

                                                          cATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATAc                                                              >  2:3099561/1‑125 (MQ=255)

                                                          cATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATAc                                                              >  2:3099675/1‑125 (MQ=255)

                                                           aTGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATAcc                                                             >  2:3099816/1‑125 (MQ=255)

                                                           aTGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATAcc                                                             <  1:3099398/125‑1 (MQ=255)

                                                           aTGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATAcc                                                             >  1:3099699/1‑125 (MQ=255)

                                                           aTGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATAc                                                              <  2:3099399/124‑1 (MQ=255)

                                                                 aaGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAg                                                       >  1:3099789/1‑125 (MQ=255)

                                                                     cgcgCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACaa                                                        >  1:3100044/1‑120 (MQ=255)

                                                                     cgcgCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGaaa                                                    <  1:3099406/124‑1 (MQ=255)

                                                                        gcagcaGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGaa                                                     >  2:3099840/1‑120 (MQ=255)

                                                                        gcagcaGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAg                                                >  2:3099691/1‑125 (MQ=255)

                                                                         cagcagGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAgg                                               <  1:3099412/125‑1 (MQ=255)

                                                                           gcagGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAg                                             <  2:3099415/125‑1 (MQ=255)

                                                                           gcagGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAg                                             >  1:3099671/1‑125 (MQ=255)

                                                                           gcagGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGG‑‑GATCACAGTCCTCATACCTACAAGAAAGCAGGAGCg                                           >  1:3099965/1‑125 (MQ=255)

                                                                              ggTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGt                                          <  2:3099421/125‑1 (MQ=255)

                                                                               gTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATCTGGTATACGAAATGGaact                                                                                                            >  1:3099918/1‑56 (MQ=255)

                                                                                ttCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCCTAGGGTGATCACAGTCCTCATACCTACAAGAAAGc                                                  >  2:3099919/1‑115 (MQ=255)

                                                                                   aGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAATAAAGCAGGAGCGTTgcg                                      <  1:3099429/124‑1 (MQ=255)

                                                                                   aGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTgcgc                                     <  2:3099427/125‑1 (MQ=255)

                                                                                    ggTCGAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGcgcg                                    >  1:3100009/1‑125 (MQ=255)

                                                                                        gAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGaa                                >  1:3099841/1‑125 (MQ=255)

                                                                                        gAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGaa                                <  2:3099435/125‑1 (MQ=255)

                                                                                        gAAGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGaa                                <  1:3099433/125‑1 (MQ=255)

                                                                                         aaGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGaa                                >  2:3099735/1‑124 (MQ=255)

                                                                                         aaGTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAAt                               >  1:3099746/1‑125 (MQ=255)

                                                                                           gTTCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATAc                             <  2:3099440/125‑1 (MQ=255)

                                                                                            ttCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATAc                             >  2:3099743/1‑124 (MQ=255)

                                                                                             tCGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACATTCGGCCTGCTTAGGGTGATAACAGTCCTCATACATACAAGAAAGCAGGAGCGTTGCGCGTGAATAc                             >  1:3099728/1‑123 (MQ=255)

                                                                                              cGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTcc                          >  1:3099445/1‑125 (MQ=255)

                                                                                              cGAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTcc                          <  2:3099445/125‑1 (MQ=255)

                                                                                               gAAATATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTccc                         >  2:3099682/1‑125 (MQ=255)

                                                                                                aaaTATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCg                                           >  2:3099874/1‑106 (MQ=255)

                                                                                                aaaTATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTccc                         <  2:3099451/124‑1 (MQ=255)

                                                                                                 aaTATTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTCCCtt                       <  1:3099454/125‑1 (MQ=255)

                                                                                                  atatTCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAg                                                   >  2:3099710/1‑96 (MQ=255)

                                                                                                     ttCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTCCCTTccc                    >  1:3099892/1‑124 (MQ=255)

                                                                                                      tCATGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTCCCTTCCCGa                  <  2:3099457/125‑1 (MQ=255)

                                                                                                      tCATGCTGAAAATATATGGTATACGAAATGAAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTCCGCGTGAATACTCCCTTCCCGa                  >  2:3099623/1‑125 (MQ=255)

                                                                                                        aTGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTg                                                                              >  2:3099761/1‑63 (MQ=255)

                                                                                                         tGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTCCCTTCCCg                   >  2:3099943/1‑121 (MQ=255)

                                                                                                         tGCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTCCCTTCCCGatca               >  1:3099778/1‑125 (MQ=255)

                                                                                                          gCTGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTCCCTTCCCGatcaa              <  1:3099463/125‑1 (MQ=255)

                                                                                                            tGAAAATATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTCCCTTCCCGatcaatc            <  2:3099464/125‑1 (MQ=255)

                                                                                                              aaaaTATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTCCCTTCCCGATCAATCAg          >  2:3100130/1‑125 (MQ=255)

                                                                                                               aaaTATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTCCCTTCCCGatcaa              >  2:3099893/1‑120 (MQ=255)

                                                                                                                aaTATATGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTCCCTTCCCGATCAATCAGGt        >  1:3099603/1‑125 (MQ=255)

                                                                                                                  tatatGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTCCCTTCCCGATCAATCAgg         >  2:3099796/1‑122 (MQ=255)

                                                                                                                   atatGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTCCCTTCCCGATCAATCAGGTGGc     >  2:3099772/1‑125 (MQ=255)

                                                                                                                   atatGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTCCCTTCCCGATCAATCAGGTGGc     <  2:3099471/125‑1 (MQ=255)

                                                                                                                    tatGGTATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATAACTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTCCCTTCCCGATCAATCAGGTGGc     >  1:3099756/1‑124 (MQ=255)

                                                                                                                      tGGTATACGAAACGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTCCCTTCCCGATCAATCAGGTGGCtgt  <  1:3099473/125‑1 (MQ=255)

TCGGCTGGGTCAGGGCCAGACGCTCGGCTGCCCGGGATACATTCTGTTCACGCAGCAACATGTCGAAGACGCGCAGCAGGTTCAGGTCGAAGTTCGAAATATTCATGCTGAAAATATATGGCATACGAAATGGAAATTTCAAAAATACCTTCGGCCTGCTTAGGGTGATCACAGTCCTCATACCTACAAGAAAGCAGGAGCGTTGCGCGTGAATACTCCCTTCCCGATCAATCAGGTGGCTGT  >  AE015451/2328205‑2328447

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 16 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`