| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AE015451 | 278,744 | +A | intergenic (‑239/+75) | PP_0224 ← / ← sctC | Monooxygenase, DszC family/sulfur compound ABC transporter ‑ ATP‑binding subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451 | 278,742 | 1 | . | A | 95.2% | 885.9 / 39.5 | 271 | intergenic (‑237/+77) | PP_0224/sctC | Monooxygenase, DszC family/sulfur compound ABC transporter ‑ ATP‑binding subunit |
| Reads supporting (aligned to +/- strand): ref base . (7/6); new base A (168/90); total (175/96) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.53e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.39e-01 | |||||||||||
Only 100 of 280 total aligned reads displayed.
AGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑T‑AACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGC > AE015451/278618‑278861 | aGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑t < 1:268570/125‑1 (MQ=255) aCGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑T‑aa > 1:268739/1‑125 (MQ=255) gtgtGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑T‑aaac < 1:268572/125‑3 (MQ=255) tgtgCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑T‑AAacc > 1:268952/1‑125 (MQ=255) gtgCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑T‑AAacc < 1:268575/124‑1 (MQ=255) tgCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑T‑AAaccc < 2:268577/124‑2 (MQ=255) gtccggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTcc < 2:268580/124‑1 (MQ=255) gtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTacac > 2:268798/1‑124 (MQ=255) gtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTa < 2:268584/121‑1 (MQ=255) tggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTa < 1:268586/120‑1 (MQ=255) ggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTacaca > 1:268905/1‑123 (MQ=255) gtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTAcacaca > 2:268754/1‑124 (MQ=255) gtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTATTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GTG‑TAAACCCGCTCCTacac > 2:268967/1‑121 (MQ=255) tatatataCCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTc < 2:268592/124‑1 (MQ=255) atatataCCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCaa > 1:268762/1‑125 (MQ=255) atatataCCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCa > 1:269087/1‑124 (MQ=255) tatataCCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCaa > 2:268938/1‑124 (MQ=255) atataCCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGa > 1:268923/1‑125 (MQ=255) tataCCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCaa > 2:268908/1‑122 (MQ=255) tataCCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAg > 1:268777/1‑123 (MQ=255) ataCCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATc > 2:268736/1‑125 (MQ=255) ataCCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑AGG‑TAAACCCGCTCCTACACACATGCCTCAAGATc < 1:268595/125‑1 (MQ=255) cccTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCtgt > 1:268806/1‑125 (MQ=255) tAATGTTTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCa < 1:268599/125‑1 (MQ=255) tAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGc > 2:268963/1‑124 (MQ=255) tAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCa > 1:268796/1‑125 (MQ=255) tAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCAGCTCCTACACACATGCCTCAAGATCTGTGc > 1:269077/1‑124 (MQ=255) tAATGATTTACAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGc > 2:268825/1‑124 (MQ=255) tGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACATAGGTGCCGCGATCGTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTg < 1:268601/125‑1 (MQ=255) tGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGc > 2:269122/1‑107 (MQ=255) tttATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGc > 1:269046/1‑118 (MQ=255) tttATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTa < 2:268604/124‑1 (MQ=255) tttATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAg > 1:268813/1‑125 (MQ=255) ttATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATc > 2:269156/1‑112 (MQ=255) ttATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAgg > 1:268940/1‑125 (MQ=255) ttATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAgg < 2:268606/125‑1 (MQ=255) tataAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGa < 1:268607/125‑1 (MQ=255) taAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAg < 2:268612/124‑1 (MQ=255) taAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGc < 1:268613/125‑1 (MQ=255) aaaTTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCtgt > 2:269026/1‑110 (MQ=255) aaaTTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCgg < 2:268617/125‑1 (MQ=255) aaTTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCggg < 1:268618/125‑1 (MQ=255) aTTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCggg > 1:268722/1‑124 (MQ=255) ttttATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGttt < 2:268623/125‑1 (MQ=255) tttATGAACTAACTTTTTGGCATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTa < 1:268624/125‑1 (MQ=255) ttATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTAc < 1:268627/125‑1 (MQ=255) tATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTAcc > 2:268716/1‑125 (MQ=255) tGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTAccc > 2:268776/1‑124 (MQ=255) actaactTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGa < 2:268630/125‑1 (MQ=255) ctaactTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCggg > 2:269016/1‑113 (MQ=255) ctaactTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTa > 2:269010/1‑117 (MQ=255) ctaactTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGaa < 2:268632/125‑1 (MQ=255) ctTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGTTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCgg > 2:269052/1‑108 (MQ=255) ctTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAgg < 1:268634/124‑1 (MQ=255) tttttGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGc > 1:268980/1‑125 (MQ=255) tttGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTAcc > 1:269228/1‑112 (MQ=255) tGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCgg > 2:269183/1‑103 (MQ=255) tGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCg > 1:268867/1‑123 (MQ=255) ggAATATTGATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGCAAGGGCCGGa > 2:268835/1‑124 (MQ=255) gAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGaa > 2:268675/1‑124 (MQ=255) gAATATTTATAGAAGGGGGATTTGTTACAGAGGCGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGCAGGAGCg > 2:269033/1‑100 (MQ=38) agtatTTATAGAAGGGGGATTTGTCACAGAGGCACCGTGCTCTTCGCGGGG‑A‑AACCCGCTCCTACACACATGCCTCAAGATCTGTGCTCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAAc > 1:269142/3‑124 (MQ=37) aaTATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACa > 2:268805/1‑125 (MQ=255) atatTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGACAGGGCCGGAACAg > 2:268788/1‑125 (MQ=255) atatTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACa > 1:269035/1‑124 (MQ=255) tatTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAgg < 1:268638/125‑1 (MQ=255) atTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGt > 2:268892/1‑125 (MQ=255) atTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACAAGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACa > 1:268884/1‑122 (MQ=255) tttATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGtt < 2:268642/125‑1 (MQ=255) ttATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGttt > 2:268947/1‑125 (MQ=255) ttATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGttt > 2:268902/1‑125 (MQ=255) ttATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGGTTACCCGCGAAAGGGCCGGAACAgg > 1:269067/1‑122 (MQ=255) ataGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTa > 1:268915/1‑124 (MQ=255) ataGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTAc > 2:268994/1‑125 (MQ=255) taGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACt < 1:268644/125‑1 (MQ=255) gAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCg > 1:268842/1‑125 (MQ=255) gAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCg > 2:268866/1‑125 (MQ=255) gAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGACTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGttt > 1:268969/1‑120 (MQ=255) aaGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCgg > 1:268934/1‑125 (MQ=255) aGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCTCTGTAGGAGCGGGttt > 2:268924/1‑92 (MQ=255) aGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCgg < 2:268647/124‑1 (MQ=255) gggggATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAg > 2:269246/1‑125 (MQ=255) gggggATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTCACTCGGAg > 2:268957/1‑125 (MQ=255) ggATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGcc < 1:268650/125‑1 (MQ=255) gATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCg > 1:268702/1‑125 (MQ=255) tttGTTACAGAGGTGCCGGGCTCTTCGC‑GGGCA‑AACCCGCTCCTACACACATGCCTCCAGATCTGTGCACTGTAGCAGCGGGTTTACCCGCGAACGGGCCGGCACAGGTTTACTCGGAGGc > 2:269061/1‑121 (MQ=38) tGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGt < 2:268652/125‑1 (MQ=255) ttACAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTcc < 1:268654/125‑1 (MQ=255) aCAGAGGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCg > 1:269018/1‑125 (MQ=255) gagGTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTcc < 1:268658/120‑1 (MQ=255) agGTGCCGGGCTCTTTGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGa < 2:268659/108‑1 (MQ=255) gTGCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAAc < 2:268661/125‑1 (MQ=255) gCCGGGCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACt < 1:268663/124‑1 (MQ=255) gggCTCTTCGC‑GGG‑TAAACCCGCTCCTACACGCATGCCTc < 2:268667/40‑1 (MQ=11) gggCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTgcg > 1:268996/1‑125 (MQ=255) ggCTCTTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTgcgc > 1:269102/1‑125 (MQ=255) tctTCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTgc > 2:269100/1‑120 (MQ=255) ttCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGaa < 1:268670/125‑1 (MQ=255) tCGC‑GGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCAGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAAc > 1:268875/1‑125 (MQ=255) gc‑gGG‑TAAACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTg > 1:269263/1‑125 (MQ=255) | AGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGC‑GGG‑T‑AACCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGC > AE015451/278618‑278861 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |