| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AE015451 | 5,674,751 | +G | intergenic (+113/+27) | rhlE‑II → / ← yceI | ATP‑dependent RNA helicase/polyisoprene‑binding protein, acidic stress response factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451 | 5,674,750 | 1 | . | G | 99.6% | 291.5 / ‑5.2 | 239 | intergenic (+112/+28) | rhlE‑II/yceI | ATP‑dependent RNA helicase/polyisoprene‑binding protein, acidic stress response factor |
| Reads supporting (aligned to +/- strand): ref base . (0/1); major base G (90/147); minor base A (1/0); total (91/148) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.82e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.76e-01 | |||||||||||
Only 100 of 258 total aligned reads displayed.
CGCAAGGGCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGC‑G‑CGCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTT > AE015451/5674627‑5674867 | cGCAAGGGCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAgc < 2:4328842/124‑1 (MQ=255)cGCAAGGGCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAgc < 1:4328844/124‑1 (MQ=255) cAAGGGCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAgc‑g > 2:4329070/1‑123 (MQ=255) aGGGCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAgc‑ggc < 2:4328845/123‑3 (MQ=255) ggCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAgc‑ggcccc > 1:4329167/1‑119 (MQ=255) ggCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAgc‑gg > 2:4329130/1‑119 (MQ=255) gCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAgc‑ggccccc < 1:4328848/124‑7 (MQ=255) tAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCg > 1:4329234/1‑122 (MQ=255) aaGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGtttt > 1:4329132/1‑124 (MQ=255) aGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGtttt < 1:4328856/123‑1 (MQ=255) aCCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAg > 2:4329327/1‑123 (MQ=255) aCCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGc > 2:4329221/1‑124 (MQ=255) ccGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCa < 2:4328857/121‑1 (MQ=255) cGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCTGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCt < 2:4328859/123‑1 (MQ=255) cGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTg < 1:4328861/124‑1 (MQ=255) aGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCt < 2:4328868/121‑1 (MQ=255) aGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTgg > 1:4329403/1‑123 (MQ=255) aGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTgg > 1:4329298/1‑123 (MQ=255) ggggCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCt < 1:4328871/119‑1 (MQ=255) ggggCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCa > 2:4329279/1‑123 (MQ=255) gggCTGCTTCGCAGCCCTATCACGACTCATGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTgg < 2:4328872/120‑1 (MQ=37) gctgctTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGaaa < 2:4328875/124‑1 (MQ=255) ctgctTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAAt < 1:4328876/124‑1 (MQ=255) ctgctTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAAt > 1:4329098/1‑124 (MQ=255) ctTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGGGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTAc > 2:4329150/1‑124 (MQ=255) gCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACt < 2:4328882/121‑1 (MQ=255) gCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTc < 1:4328881/123‑1 (MQ=255) aGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTg < 1:4328886/123‑1 (MQ=255) aGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGc < 2:4328887/124‑1 (MQ=255) aGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGc > 1:4329225/1‑124 (MQ=255) gCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTg > 1:4329205/1‑106 (MQ=255) cccTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCtt < 2:4328893/124‑1 (MQ=255) cccTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCt < 1:4328891/123‑1 (MQ=255) tATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTcac > 2:4329284/1‑124 (MQ=255) aTCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGc > 1:4329064/1‑118 (MQ=255) cACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACAcc < 1:4328897/124‑1 (MQ=255) aCGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTcaca < 2:4328899/121‑1 (MQ=255) aCGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCacac < 2:4328903/122‑1 (MQ=255) aCGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCacac < 1:4328900/122‑1 (MQ=255) cGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACAcc < 1:4328907/122‑1 (MQ=255) cacaAGGCCGCTCCGGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCg < 2:4328910/123‑1 (MQ=255) acaAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGa < 2:4328912/123‑1 (MQ=255) aGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACAcc < 1:4328915/115‑1 (MQ=255) ggCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACt < 2:4328916/123‑1 (MQ=255) gCCGCTCCTGCAGAGAATTTCGTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACt < 2:4328919/122‑1 (MQ=255) cGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCtt < 2:4328922/113‑1 (MQ=255) cGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGa > 1:4329369/1‑116 (MQ=255) gCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGatat > 2:4329260/1‑124 (MQ=255) gCTCCTGCAGAGAAGTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGatat < 1:4328925/124‑1 (MQ=255) cTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtc < 2:4328927/124‑1 (MQ=255) cTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtccag < 2:4328929/124‑1 (MQ=255) tGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtccagg < 1:4328935/124‑1 (MQ=255) tGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtcc < 1:4328933/121‑1 (MQ=255) gCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtcca < 2:4328936/121‑1 (MQ=255) gagaATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtccag < 2:4328938/119‑1 (MQ=255) aTTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGt < 2:4328942/124‑1 (MQ=255) tCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTg < 1:4328945/124‑1 (MQ=255) tCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTg > 2:4329171/1‑124 (MQ=255) cTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGc > 2:4329236/1‑124 (MQ=255) cTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGc < 1:4328947/124‑1 (MQ=255) ttGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTg < 2:4328948/122‑1 (MQ=255) ttGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCg < 1:4328951/124‑1 (MQ=255) gATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGc > 2:4329251/1‑121 (MQ=255) aTCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtc > 2:4329336/1‑104 (MQ=255) aTCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGaa < 2:4328953/123‑1 (MQ=255) ctctACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAg < 1:4328956/122‑1 (MQ=255) tctACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTa < 1:4328960/123‑1 (MQ=255) ctACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAg > 2:4329313/1‑123 (MQ=255) tACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAtccaggtcc < 2:4328962/106‑1 (MQ=255) aCAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCAc > 1:4329316/1‑124 (MQ=255) cAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCAcc < 1:4328965/124‑1 (MQ=255) ggAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGC‑GTCCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCAccc < 2:4328967/123‑1 (MQ=255) aGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATAACTTGTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCgag > 1:4329245/1‑122 (MQ=38) gCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGc > 1:4329329/1‑124 (MQ=255) cGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATAGCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGc < 1:4328970/123‑1 (MQ=255) ggCCTTCTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTcaca < 2:4328972/73‑1 (MQ=37) gCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCtt > 1:4329134/1‑124 (MQ=255) ccTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGGAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCttt > 1:4329294/1‑124 (MQ=255) ccTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCttt < 1:4328975/124‑1 (MQ=255) cTTGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTg > 1:4329282/1‑124 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGTCACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGa < 2:4328978/124‑1 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGa < 1:4328979/124‑1 (MQ=255) tgtCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATg < 2:4328985/123‑1 (MQ=255) tgtCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATg < 1:4328984/123‑1 (MQ=255) tgtCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGc > 1:4329175/1‑124 (MQ=255) tCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGcc > 2:4329093/1‑123 (MQ=255) tCGTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCg > 1:4329467/1‑124 (MQ=255) gTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGc < 2:4328989/120‑1 (MQ=255) gTGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGaa > 1:4329267/1‑124 (MQ=255) tGATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGaa > 1:4329431/1‑123 (MQ=255) gATAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGt > 2:4329208/1‑124 (MQ=255) aTAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTc > 1:4329366/1‑124 (MQ=255) aTAGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACAGATATCCCGGTCCAGGGTCTGAGAAGTAGCACCCGGGCCTTTGATGCCGAAGt < 1:4328990/123‑1 (MQ=255) aGGGCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgt < 1:4328992/124‑1 (MQ=255) gggCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 2:4329315/1‑124 (MQ=255) gggCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 2:4329367/1‑124 (MQ=255) ggCCGCAAAGCGG‑CCCCCTCGGTTTCCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgttc < 1:4328997/124‑1 (MQ=255) gCCGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgttca < 2:4328999/124‑1 (MQ=255) ccGCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCGGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGc < 1:4329000/102‑1 (MQ=255) gCAAAGCGG‑CCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgttcaggt < 1:4329004/124‑1 (MQ=255) | CGCAAGGGCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGC‑G‑CGCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTT > AE015451/5674627‑5674867 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |