| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AE015451 | 4,498,318 | (T)7→6 | coding (1686/2049 nt) | PP_3988 ← | conserved protein of unknown function |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451 | 4,498,312 | 0 | T | . | 99.0% | 1089.6 / 3.1 | 208 | coding (1692/2049 nt) | PP_3988 | conserved protein of unknown function |
| Reads supporting (aligned to +/- strand): ref base T (2/0); new base . (80/126); total (82/126) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.54e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.55e-01 | |||||||||||
Only 100 of 231 total aligned reads displayed.
TAACTCAAGCGTAGCAGGCTGACCAGGATCAACCGAGCGCTCCTGCACTACAGTGCCCGAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTGTTTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGCACTGTGCAGCCAGTTTTTTATGATCTGATAATGCGGATGCGAAACATTGAAAGATTCCCTATCAATATT > AE015451/4498162‑4498458 | tAACTCAAGCGTAGCAGGCTGACCAGGATCAACCGAGCGCTCCTGCACTACAGTGCCCGAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAAtgtttgt < 2:3824711/151‑1 (MQ=255) aaCTCAAGCGTAGCAGGCTGACCAGGATCAACCGAGCGCTCCTGCACTACAGTGCCCGAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAAtgtttgtt < 2:3824714/151‑1 (MQ=255) aCTCAAGCGTAGCAGGCTGACCAGGATCAACCGAGCGCTCCTGCACTACAGTGCCCGAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATgtttgttt < 1:3824716/151‑1 (MQ=255) cTCAAGCGTAGCAGGCTGACCAGGATCAACCGAGCGCTCCTGCACTACAGTGCCCGAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTGtttt > 2:3824974/1‑151 (MQ=255) tCAAGCGTAGCAGGCTGACCAGGATCAACCGAGCGCTCCTGCACTACAGTGCCCGAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTGttttt > 2:3824850/1‑151 (MQ=255) tCAAGCGTAGCAGGCTGACCAGGATCAACCGAGCGCTCCTGCACTACAGTGCCCGAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTGttttt > 1:3825203/1‑151 (MQ=255) cAAGCGTAGCAGGCTGACCAGGATCAACCGAGCGCTCCTGCACTACAGTGCCCGAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTGtttttt < 1:3824718/151‑1 (MQ=255) aaGCGTAGCAGGCTGACCAGGATCAACCGAGCGCTCCTGCACTACAGTGCCCGAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTGttttttc > 1:3824897/1‑150 (MQ=255) aaGCGTAGCAGGCTGACCAGGATCAACCGAGCGCTCCTGCACTACAGTGCCCGAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTGttttttc > 2:3824934/1‑150 (MQ=255) aaGCGTAGCAGGCTGACCAGGATCAACCGAGCGCTCCTGCACTACAGTGCCCGAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTGtttttt > 2:3825023/1‑150 (MQ=255) gCGTAGCAGGCTGACCAGGATCAACCGAGCGCTCCTGCACTACAGTGCCCGAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTGttttttctt < 2:3824721/151‑4 (MQ=255) cGTAGCAGGCTGACCAGGATCAACCGAGCGCTCCTGCACTACAGTGCCCGAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTGttttttctt < 1:3824724/150‑4 (MQ=255) cGTAGCAGGCTGACCAGGATCAACCGAGCGCTCCTGCACTACAGTGCCCGAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTGttttttctt < 2:3824723/150‑4 (MQ=255) gTAGCAGGCTGACCAGGATCAACCGAGCGCTCCTGCACTACAGTGCCCGAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTGttttttcttt < 1:3824726/150‑5 (MQ=255) gCAGGCTGACCAGGATCAACCGAGCGCTCCTGCACTACAGTGCCCGAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTtcatc < 2:3824730/151‑1 (MQ=255) aGGCTGACCAGGATCAACCGAGCGCTCCTGCACTACAGTGCCCGAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTtcatca > 2:3824922/1‑150 (MQ=255) aGGCTGACCAGGATCAACCGAGCGCTCCTGCACTACAGTGCCCGAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCaa < 1:3824731/151‑1 (MQ=255) ggCTGACCAGGATCAACCGAGCGCTCCTGCACTACAGTGCCCGAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAg > 2:3824786/1‑151 (MQ=255) tGACCAGGATCAACCGAGCGCTCCTGCACTACAGTGCCCGAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAgcgc < 2:3824736/151‑1 (MQ=255) ccAGGATCAACCGAGCGCTCCTGCACTACAGTGCCCGAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCAc < 2:3824738/150‑1 (MQ=255) ggATCAACCGAGCGCTCCTGCACTACAGTGCCCGAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCtt < 1:3824739/151‑1 (MQ=255) aCCGAGCGCTCCTGCACTACAGTGCCCGAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAAc < 1:3824742/151‑1 (MQ=255) cGAGCGCTCCTGCACTACAGTGCCCGAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAg < 2:3824743/151‑1 (MQ=255) cGAGCGCTCCTGCACTACAGTGCCCGAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAg > 2:3824954/1‑151 (MQ=255) aGCGCTCCTGCACTACAGTGCCCGAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCa > 2:3824822/1‑151 (MQ=255) gcgcTCCTGCACTACAGTGCCCGAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCAc < 1:3824746/151‑1 (MQ=255) cgcTCCTGCACTACAGTGCCCGAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCAcc < 2:3824748/151‑1 (MQ=255) gcTCCTGCACTACAGTGCCCGAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCa < 1:3824750/151‑1 (MQ=255) gcTCCTGCACTACAGTGCCCGAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCa < 1:3824752/151‑1 (MQ=255) cTCCTGCACTACAGTGCCCGAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAg < 2:3824755/151‑1 (MQ=255) cTCCTGCACTACAGTGCCCGAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAg > 1:3825096/1‑151 (MQ=255) tCCTGCACTACAGTGCCCGAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGa < 2:3824757/151‑1 (MQ=255) ccTGCACTACAGTGCCCGAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGa > 1:3825177/1‑150 (MQ=255) tGCACTACAGTGCCCGAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACaa < 2:3824760/151‑1 (MQ=255) cACTACAGTGCCCGAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACaaa < 2:3824766/150‑1 (MQ=255) cACTACAGTGCCCGAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAat < 1:3824764/151‑1 (MQ=255) aCAGTGCCCGAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATAttt < 1:3824770/151‑1 (MQ=255) aCAGTGCCCGAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATAttt > 1:3824972/1‑151 (MQ=255) aCAGTGCCCGAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATAtt < 1:3824768/150‑1 (MQ=255) aGTGCCCGAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTAt < 2:3824773/151‑1 (MQ=255) ccGAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTa < 1:3824775/151‑1 (MQ=255) cGAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTAt < 1:3824777/151‑1 (MQ=255) gAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTACCAGCACCAGACAAATATTTATGCTTAtt > 1:3825265/1‑151 (MQ=255) aGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCa < 2:3824779/127‑1 (MQ=255) aGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATtc < 1:3824780/151‑1 (MQ=255) aGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATtc > 1:3825062/1‑151 (MQ=255) cTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATtcat < 2:3824784/151‑1 (MQ=255) taAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCaa < 1:3824786/151‑1 (MQ=255) taAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCaa < 2:3824788/151‑1 (MQ=255) aaaCTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCaa > 1:3825048/1‑150 (MQ=255) actTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGcc < 2:3824792/150‑1 (MQ=255) actTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCg < 1:3824794/151‑1 (MQ=255) ctTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGc < 1:3824796/151‑1 (MQ=255) ccTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATg > 1:3825070/1‑151 (MQ=255) tGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGCa < 2:3824800/150‑1 (MQ=255) tGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGCAc < 1:3824799/151‑1 (MQ=255) cTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGCACtg < 1:3824804/151‑1 (MQ=255) tGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAgc > 2:3825202/1‑87 (MQ=255) ggAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGCACtgt < 2:3824806/150‑1 (MQ=255) ggAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGATTATTCATCAACTGCCGCAATGCACtgtg > 1:3824946/1‑151 (MQ=255) gAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGCACTGTGc > 2:3825034/1‑151 (MQ=255) cTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGCACTGTGCAGc > 2:3825005/1‑151 (MQ=255) tGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGCACTGTGCAGcc > 1:3825014/1‑151 (MQ=255) tGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGCACTGTGCAGcc < 1:3824807/151‑1 (MQ=255) cGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGCACTGTGCAGCCAGt > 2:3825056/1‑151 (MQ=255) aaaCCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGc < 1:3824811/133‑1 (MQ=255) cGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGCACTGTGCAGCCAGttt < 1:3824814/145‑1 (MQ=255) gCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCTCTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGCACTGTGc < 1:3824816/132‑1 (MQ=255) gCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGCACTGTGCAGCCAGTTTTTTATGATCt > 1:3825039/1‑151 (MQ=255) tttttATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGCACTGTGCAGCCAGTTTTTTATGATCTGa < 1:3824818/151‑1 (MQ=255) tttttATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGCACTGTGCAGCCAGTTTTTTATGATCTGa < 2:3824819/151‑1 (MQ=255) tATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTGTTTTTTT‑TTTTATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGCACTGTGCAGCCAGTTTTTTATGATCTGATAAt > 2:3825108/1‑151 (MQ=255) tCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGCACTGTGCAGCCAGTTTTTTATGATCTGATAATg < 2:3824824/150‑1 (MQ=255) cTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGCACTGTGCAGCCAGTTTTTTATGATCTGATAATGCg > 1:3825007/1‑151 (MQ=255) tGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGCACTGTGCAGCCAGTTTTTTATGATCTGATAATGCgg > 1:3825158/1‑151 (MQ=255) tGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGCACTGTGCAGCCAGTTTTTTATGATCTGATAATGCgg > 2:3824885/1‑151 (MQ=255) aTCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGCACTGTGCAGCCAGTTTTTTATGATCTGATAATGCGGAt < 2:3824827/151‑1 (MQ=255) aTCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGCACTGTGCAGCCAGTTTTTTATGATCTGATAATGCGGAt > 1:3824980/1‑151 (MQ=255) aTCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGCACTGTGCAGCCAGTTTTTTATGATCTGATAATGCGGAt < 1:3824826/151‑1 (MQ=255) aTCCGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGCACTGTGCAGCCAGTTTTTTATGATCTGATAATGCGGAt > 2:3824988/1‑151 (MQ=255) ccGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGCACTGTGCAGCCAGTTTTTTATGATCTGATAATGCGGATg > 2:3825001/1‑150 (MQ=255) ccGTTACAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGCACTGTGCAGCCAGTTTTTTATGATCTGATAATGCGGATGc > 2:3825071/1‑151 (MQ=255) aCAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGCACTGTGCAGCCAGTTTTTTATGATCTGATAATGCGGATGCGaa < 1:3824831/149‑1 (MQ=255) cAATGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGCACTGTGCAGCCAGTTTTTTATGATCTGATAATGCGGATGCGAAACa < 2:3824832/151‑1 (MQ=255) aTGTTTCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGCACTGTGCAGCCAGTTTTTTATGATCTGATAATGCGGATGCGAAACAtt < 2:3824835/151‑1 (MQ=255) tttCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGCACTGTGCAGCCAGttt > 2:3825172/1‑116 (MQ=255) tttCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGCACTGTGCAGCCAGTTTTTTATGATCTGATAATGCGGATGCGAAACATTGaa < 2:3824837/151‑1 (MQ=255) tCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGCACTGTGCAGCCAGTTTTTTATGATCTGATAATGCGGATGCGAAACATTGAAAg < 1:3824842/151‑1 (MQ=255) tCGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGCACTGTGCAGCCAGTTTTTTATGATCTGATAATGCGGATGCGAAACATTGAAAg < 1:3824840/151‑1 (MQ=255) cGCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGCACTGTGCAGCCAGTTTTTTATGATCTGATAATGCGGATGCGAAACATTGAAAGa < 2:3824845/151‑1 (MQ=255) gCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGCACTGTGCAGCCAGTTTTTTATGATCTGATAATGCGGATGCGAAACATTGAAAGAt > 2:3824996/1‑151 (MQ=255) gCAATTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGCACTGTGCAGCCAGTTTTTTATGATCTGATAATGCGGATGCGAAACATTGAAAGAt < 1:3824847/151‑1 (MQ=255) aTTCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGCACTGTGCAGCCAGTTTTTTATGATCTGATAATGCGGATGCGAAACATTGAAAGATTcc < 2:3824848/151‑1 (MQ=255) ttCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGCACTGTGCAGCCAGTTTTTTATGATCTGATAAt > 1:3825111/1‑124 (MQ=255) tCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGCACTGTGCAGCCAGTTTTTTATGATCTGATAATGCGGATGCGAAACATTGAAAGATTCCCt > 1:3825125/1‑151 (MQ=255) tCAGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGCACTGTGCAGCCAGTTTTTTATGATCTGATAATGCGGATGCGAAACATTGAAAGATTCCCt > 2:3825085/1‑151 (MQ=255) aGCAAATGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGCACTGTGCAGCCAGTTTTTTATGATCTGATAATGCGGATGCGAAACATTGAAAGATTCCCTAt < 1:3824851/151‑1 (MQ=255) aaaTGTTTG‑TTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGCACTGTGCAGCCAGTTTTTTATGATCTGATAATGCGGATGCGAAACATTGAAAGATTCCCTATCaa > 1:3825010/1‑151 (MQ=255) tgtttg‑ttTTTTCTTTTTTCTAGCGCACTCTTGCTAACAGCACCATACAAATATTTATGCTTAt > 2:3825274/1‑64 (MQ=255) gtttg‑tttTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGCACTGTGCAGCCAGTTTTTTATGATCTGATAATGCGGATGCGAAACATTGAAAGATTCCCTATCAATAtt < 2:3824854/151‑1 (MQ=255) | TAACTCAAGCGTAGCAGGCTGACCAGGATCAACCGAGCGCTCCTGCACTACAGTGCCCGAGCTATAAACTACTTCCCTTGCTGGAACTGCCGTCAAACCGACGCTTTTTATCTGATCCGTTACAATGTTTCGCAATTCAGCAAATGTTTGTTTTTTTCTTTCATCAAGCGCACTCTTGCTAACAGCACCAGACAAATATTTATGCTTATTCATCAACTGCCGCAATGCACTGTGCAGCCAGTTTTTTATGATCTGATAATGCGGATGCGAAACATTGAAAGATTCCCTATCAATATT > AE015451/4498162‑4498458 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 43 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |