| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| MC JC | NC_000913 | 257,908 | Δ776 bp | 100% | insB9–[crl] | insB9, insA9, [crl] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 257908–258676 | 258683 | 8–776 | 17 [0] | [0] 17 | insB9–[crl] | insB9,insA9,[crl] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 257907 | 0 (0.000) | 15 (1.130) | 12/384 | NT | 100% | intergenic (+8/+16) | crl/insB9 | RNA polymerase holoenzyme assembly factor Crl/IS1 family transposase B |
| ? | NC_000913 | 258684 = | 0 (0.000) | pseudogene (9/331 nt) | crl | RNA polymerase holoenzyme assembly factor Crl | |||||
ACGCTTAATCACCTCATCATCTGCTGACGGTAAATTATTAGAGATCCCATTTAACCCGGTGTATCGGAATTTTGACAAAGGTCTTCAGGAAATCACCGACTGGATCGAAAAACGCTTGTGTTAAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATTCGCTGCGTATATCGCTTGCTGATTACGTGCAGCTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATATCAC > NC_000913/257648‑258141 | aCGCTTAATCACCTCATCATCTGCTGACGGTAAATTATTAGAGATCCCATTTAACCCGGTGTATCGGACTTTTGACAAAGGTCTTCAGGAAATCACCGACTGGATCGAAAAACGCTTGTGTTCAAAATTTGCTAAATTTTGCAAATTTGGTAAAACACTTCCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGAAGATTGATCAAAAAATTTACCGCACTAGACCCGTATATTAGTAAAGGTAagtacaaagataacc > 1:24485‑M1/1‑260 (MQ=255) aactggctgacgagAAATTATTAGAGATCCCATTTAACCCGGTGTATCCGAATTTTGACAAAGGTCTTCATGAAAGCACCGACTGGATCGAAAAACGCTTGTGTTAAAAAGTTGCTAAATATTGCCAATTTGGTAAAACAGTTGCATCACAGCAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCGAAAAATTTACCGCACTAGTCCCGTATATACGTTAAGGTAagagcaaagctaatcgatgctttttcgattgt < 2:24485‑M1/270‑33 (MQ=255) caacaGGAGATAGCAATGACGTTACCGAGTGGACACCCGCAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGAATATTCGTGAAGGTAagtgcaacgataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccgtaagtgcgtgaattctggggctggtggctggagctggacgcgcaggaatcccgttttacctacagttaccagtttggtctgttcgataaatcaggccactggaagagtgttccggt > 1:210536‑M1/1‑94 (MQ=255) gaTAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctg > 2:193204‑M1/1‑86 (MQ=255) aGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagttaccagtttggtctgttcgataaagc > 1:232595‑M1/1‑83 (MQ=255) aGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttctcgattgtctggctgtctgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagttaccagtttggtctgttcgataaagcaggcgactggacgagtgttccggtaaaagaccct > 1:218938‑M1/1‑83 (MQ=255) gCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtgg < 1:193204‑M1/174‑93 (MQ=255) tGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACAGCACTAGGCCCGTATATTCGCGAAGGTAagtgcaacgataatcgattctttttcgcttgtctggctgtatgcgtcaacgtgaaaccggcaccggatgtgcgtgaactctggggctggtggatgccgctggaagcgcaggtatcccgttttacctacagttacccgtttggtctgttcgctaaagcaggcgactggaagagtcgtccgggaaaagcacagggggtg > 2:206803‑M1/1‑78 (MQ=255) aaccccaaaagagcgaatTAACCAAAAAATTTACCGCCTGAGGCCCGTAGTTTCGTGAAGGTAagtgcaaagataatcgattcattttcgattgtctggctgtaggcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggtgctggaagcgcaggaatcccgttttacctacagttaccagtttggtctgttcgataaagcaggcgactggaagagtgttccggtaaaagacactgaagtggttgaactact < 2:218938‑M1/263‑209 (MQ=255) acCCGCAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaggataatcgattctttttcgattgtctggctgtatgcgtca > 1:204173‑M1/1‑60 (MQ=255) gAAGAGCAGATTGATTAAAAAAGTTACCGCACGAGGCCCAGATCTTCGTGAAGGAAagtacaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgt < 2:204173‑M1/108‑53 (MQ=255) aaaaaaGTTACCCCCCTAGGCCCGTATTATCGTGAAGGTAagtgcaaagatgatcgtgtgtgttgcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggaaggagctggaagcgcaggaatcccggttttcctacagttactagtttggtctgttcgataaagcaggcgactggaagagtgttccggtaaaagacactgaagtggttgaacgactggagcacaccctgcgtgagtttcacg < 1:213463‑M1/274‑235 (MQ=255) tataTTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagttaccagtttggtctgttcgataaagcaggcgactggaagagtgttccggtaaaagacactgaagtggttgaac > 2:83868‑M1/1‑16 (MQ=255) tataTTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcagg > 2:147995‑M1/1‑16 (MQ=255) tataTTCGTGAAGGTAagtgcaaagataatcgattcnttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgagttctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagttaccagtttgggctgtttgataaagcaggcgactggaagagggttccggtaaaa > 1:106508‑M1/1‑16 (MQ=255) ttCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgttaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagttaccagtttggtctgttcgataaagcaggcgactggaagagtgttccggtaaaagacactgaagtggttgaacgact < 1:83868‑M1/220‑209 (MQ=255) ttCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatc < 1:147995‑M1/127‑116 (MQ=255) | ACGCTTAATCACCTCATCATCTGCTGACGGTAAATTATTAGAGATCCCATTTAACCCGGTGTATCGGAATTTTGACAAAGGTCTTCAGGAAATCACCGACTGGATCGAAAAACGCTTGTGTTAAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATTCGCTGCGTATATCGCTTGCTGATTACGTGCAGCTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATATCAC > NC_000913/257648‑258141 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |