Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1430088	1430094	7	2 [1]	[1] 2	stfR	putative prophage side tail fiber protein StfR

GTCAACAAGTGCCGGGCAGGCCTCAGCCAGTGCCACCGCCGCCGGAAAATCGGCAGAAAGCGCCGCATCGTCTGCTTCAACAGCCACAACGAAGGCTGGCGAAGCCACTGAACAGGC  >  NC_000913/1429975‑1430091                                                                                                                 |     gTCAACAAGTGCCGGGCAGGCCTCAGCCAGTGCCACCGCCGCCGGAAAATCGGCAGAAAGCGCCGCATCGTCTGCTTCAACAGCCACAACGAAGGCTGGCGAAGCCACTGAAc      >  1:88742/1‑113 (MQ=255)     acaaGTGCCGGGCAGGCCTCAGCCAGTGCCACCGCCGCCGGAAAAACGGCAGAAAGCGCCGCATCGTCTGCGTCAACAGCCACAACGAAGGCTGGCGAAGCCACTGAACAGGc  <  2:88742/113‑1 (MQ=255)                                                                                                                 |     GTCAACAAGTGCCGGGCAGGCCTCAGCCAGTGCCACCGCCGCCGGAAAATCGGCAGAAAGCGCCGCATCGTCTGCTTCAACAGCCACAACGAAGGCTGGCGAAGCCACTGAACAGGC  >  NC_000913/1429975‑1430091

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑