| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AC_000091 | 483,561 | (C)6→7 | coding (67/3150 nt) | acrB ← | multidrug efflux system protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AC_000091 | 483,555 | 1 | . | C | 98.2% | 402.4 / 1.1 | 109 | coding (73/3150 nt) | acrB | multidrug efflux system protein |
| Reads supporting (aligned to +/- strand): ref base . (1/1); new base C (40/67); total (41/68) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.66e-01 | |||||||||||
Only 100 of 135 total aligned reads displayed.
CGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑G‑‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCT > AC_000091/483466‑483639 | cGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑g > 2:763601/1‑90 (MQ=255) gCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑G‑‑c > 2:1563621/1‑90 (MQ=255) aTCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑G‑‑cc‑c > 1:2629457/1‑90 (MQ=255) aTCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑G‑‑cc‑c > 1:2763629/1‑90 (MQ=255) tCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑G‑‑cc‑cc > 1:1157150/1‑90 (MQ=255) tCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑G‑‑cc‑cc > 1:1931379/1‑90 (MQ=255) cAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑G‑‑cc‑cc‑c > 1:2203975/1‑90 (MQ=255) cAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑G‑‑cc‑cc‑c < 2:1210128/90‑1 (MQ=255) cAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑G‑‑cc‑cc‑c < 1:1820078/90‑1 (MQ=255) gcgcCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑G‑‑cc‑cc‑ccc < 1:1244278/90‑2 (MQ=255) cgcCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑G‑‑cc‑cc‑ccct < 1:2822757/90‑3 (MQ=255) cgcCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑G‑‑cc‑cc‑ccct < 1:2400501/90‑3 (MQ=255) cgcCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑G‑‑cc‑cc‑ccct < 2:2546283/90‑3 (MQ=255) cgcCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑G‑‑cc‑cc‑ccct < 1:3056795/90‑3 (MQ=255) cgcCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑G‑‑cc‑cc‑ccct < 2:1000167/90‑3 (MQ=255) gcCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑G‑‑cc‑cc‑ccctg > 2:2781476/1‑87 (MQ=255) gcCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑G‑‑cc‑cc‑ccctg > 2:1884989/1‑87 (MQ=255) gcCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑G‑‑cc‑cc‑ccctg < 1:3263885/90‑4 (MQ=255) ccGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑G‑‑cc‑cc‑ccctgc < 1:1034688/90‑5 (MQ=255) ccGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑G‑‑cc‑cc‑ccctgc > 2:2861329/1‑86 (MQ=255) ggggTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCa < 2:2234262/90‑1 (MQ=255) ggggTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCa > 1:688879/1‑90 (MQ=255) ggggTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCa > 2:2431064/1‑90 (MQ=255) ggTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAAc < 2:171053/90‑1 (MQ=255) ggTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAAc < 1:608953/90‑1 (MQ=255) ggTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAAc > 1:2018044/1‑90 (MQ=255) tAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACat > 2:1148329/1‑90 (MQ=255) tAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACat > 2:3304955/1‑90 (MQ=255) aggCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACatgatg < 1:859025/90‑1 (MQ=255) aggCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACatgatg > 2:1744614/1‑90 (MQ=255) ggAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑G‑‑CC‑CCGCCTGCCAACATGATGATaa > 1:2868765/1‑90 (MQ=255) agaTCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATg < 1:1136537/90‑1 (MQ=255) tCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCg < 1:2963507/90‑1 (MQ=255) tCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCg < 1:2821775/90‑1 (MQ=255) gTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGAt > 1:419556/1‑90 (MQ=255) gTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGAt < 1:2142822/90‑1 (MQ=255) gTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGAt < 1:2296737/90‑1 (MQ=255) tACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCa > 1:494965/1‑90 (MQ=255) tACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCa > 1:2659076/1‑90 (MQ=255) aCTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAATATGATGATAATGGCGATCAc < 2:2276761/90‑1 (MQ=255) aCTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCAc > 2:2004004/1‑90 (MQ=255) aCTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCAc < 2:1207646/90‑1 (MQ=255) aCTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCAc < 2:3268260/90‑1 (MQ=255) tGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCAccc > 2:2851793/1‑90 (MQ=255) tGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGAGATCAccc > 2:1942413/1‑90 (MQ=255) cggcggTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACg < 1:1335326/90‑1 (MQ=255) ggcggTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGc > 2:1860740/1‑90 (MQ=255) gcggTGCAACCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCa < 2:1818528/90‑1 (MQ=255) cggTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCATGCaa < 1:2649234/90‑1 (MQ=255) gTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCaaaa < 1:794446/90‑1 (MQ=255) gTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCaaaa > 1:979702/1‑90 (MQ=255) gTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCaaaa < 1:2583023/90‑1 (MQ=255) tGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GCCCC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCaaaa < 2:64905/90‑1 (MQ=255) gCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAAt < 2:3278228/90‑1 (MQ=255) gCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAAt < 1:480042/90‑1 (MQ=255) gCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAAt > 1:2855272/1‑90 (MQ=255) cAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATc < 2:303479/90‑1 (MQ=255) cAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATc > 1:3487216/1‑90 (MQ=255) tCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCggg < 1:2549459/90‑1 (MQ=255) tCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCggg < 2:2644286/90‑1 (MQ=255) cGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGc < 2:2338789/90‑1 (MQ=255) cGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGc > 1:733552/1‑90 (MQ=255) gTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGcg > 2:2394302/1‑90 (MQ=255) gATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGcgatcg < 1:102350/90‑1 (MQ=255) tatTGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGcgatcgat < 1:2264958/90‑1 (MQ=255) atTGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGGTCGATa > 1:1565563/1‑90 (MQ=255) ttGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATaa < 2:2896591/90‑1 (MQ=255) ttGCGCCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATaa < 1:2397588/90‑1 (MQ=255) tGCGCCACGGGCAGTTTGAGGATCACCA‑G‑‑CCTCC‑CCCGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATaaa < 2:965055/90‑1 (MQ=255) gcgcCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAg < 1:1431689/90‑1 (MQ=255) gcgcCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAg < 1:358898/90‑1 (MQ=255) cgcCACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGa > 1:735831/1‑90 (MQ=255) ccACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATGATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGaaa < 2:2417021/90‑1 (MQ=255) ccACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGaaa < 1:2130276/90‑1 (MQ=255) ccACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGaaa < 1:1452354/90‑1 (MQ=255) cACCGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAAt < 1:80975/90‑1 (MQ=255) ccGGCAGTTTGAGGATCGCCA‑GCCCC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAAtt < 2:2544556/90‑1 (MQ=255) ccGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTa > 2:247468/1‑90 (MQ=255) cGGCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAg > 2:2867676/1‑90 (MQ=255) gCAGTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGc < 2:2793377/90‑1 (MQ=255) tgTTTGAGGGTCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCCCCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCAt < 2:2656387/89‑1 (MQ=255) gTTTGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATg < 2:2768126/90‑1 (MQ=255) tttGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGt < 1:2039248/90‑1 (MQ=255) ttGAGGATCGCCATC‑‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTc < 2:376538/90‑1 (MQ=255) ttGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTc < 1:1647464/90‑1 (MQ=255) tGAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCt < 2:361337/90‑1 (MQ=255) gAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCtt > 2:1645252/1‑90 (MQ=255) gAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCtt > 1:1604669/1‑90 (MQ=255) gAGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCtt < 1:1804503/90‑1 (MQ=255) aGGATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGCTGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGTCATTTCTTa < 2:69522/90‑1 (MQ=255) ggATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTaa < 2:2087678/90‑1 (MQ=255) ggATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTaa < 1:2585000/90‑1 (MQ=255) gATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAAc < 1:1835328/90‑1 (MQ=255) gATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAAc > 1:770751/1‑90 (MQ=255) gATCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAAc > 2:1461039/1‑90 (MQ=255) aTCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACg < 2:3377965/90‑1 (MQ=255) tCGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACgg < 1:2418034/90‑1 (MQ=255) cGCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGc > 2:923493/1‑90 (MQ=255) gCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCt < 1:1459989/90‑1 (MQ=255) gCCA‑GC‑CC‑CC‑CCTGCCAACATGATGATAATGGCGACCACCCACGCAAAAATCGAGCGATCGATACAGAAATAAAACATGTCTTACCGGCt > 2:2884629/1‑90 (MQ=255) | CGCATCAGCGCCGGGGTAGGAGGCGGAGATCGTTACTGCCGGCGGTGCAATCGTAGGATATTGCGCCACCGGCAGTTTGAGGATCGCCA‑G‑‑CC‑CC‑CCTGCCAACATGATGATAATGGCGATCACCCACGCAAAAATCGGGCGATCGATAAAGAAATTAGGCATGTCTTAACGGCT > AC_000091/483466‑483639 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |