New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AC_000091 1209367 =21 (0.160)86 (0.790) 65/146 0.7 83.4% coding (290/630 nt) ycfK hypothetical protein
?AC_000091 1211196 = 17 (0.160)intergenic (‑500/‑66) tfaE/pin predicted tail fiber assembly protein/site‑specific DNA recombinase

Only 100 of 213 total aligned reads displayed.

ACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTA  >  AC_000091/1209279‑1209456
                                                                                        |                                                                                         
cgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgtt                                                                                          >  2:2966936‑M1/89‑90 (MQ=255)
cgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgtt                                                                                          >  2:3000341‑M1/89‑90 (MQ=255)
 gcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTg                                                                                         >  1:1861156‑M1/88‑90 (MQ=255)
  cgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTgg                                                                                        >  2:763366‑M1/87‑90 (MQ=255)
   gtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGt                                                                                       <  2:3337315‑M1/5‑1 (MQ=255)
   gtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGt                                                                                       <  2:2405697‑M1/5‑1 (MQ=255)
   gCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTTGAAAACCTTGGT                                                                                       >  2:3360627‑M1/1‑90 (MQ=255)
     acatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGttt                                                                                     <  1:3034894‑M1/7‑1 (MQ=255)
      catagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTg                                                                                    >  2:3476079‑M1/83‑90 (MQ=255)
      cTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTG                                                                                    <  2:2442348‑M1/90‑1 (MQ=255)
      cTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTG                                                                                    >  1:274241‑M1/1‑90 (MQ=255)
      cTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTG                                                                                    >  2:2916990‑M1/1‑90 (MQ=255)
       ttCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGG                                                                                   >  2:2168092‑M1/1‑90 (MQ=255)
       atagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTgg                                                                                   <  1:2906757‑M1/9‑1 (MQ=255)
         agccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGga                                                                                 <  1:2813942‑M1/11‑1 (MQ=255)
         agccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGga                                                                                 <  1:1186978‑M1/11‑1 (MQ=255)
          gcgcgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAG                                                                                <  2:2840643‑M1/90‑1 (MQ=255)
          gcgcgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAG                                                                                <  2:89074‑M1/90‑1 (MQ=255)
           cgcgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGA                                                                               <  2:209737‑M1/90‑1 (MQ=255)
            caataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGaa                                                                              <  2:2268481‑M1/14‑1 (MQ=255)
             cgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAG                                                                             <  1:2232550‑M1/90‑1 (MQ=255)
             cgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAG                                                                             <  2:2871209‑M1/90‑1 (MQ=255)
             aataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAg                                                                             >  1:2881948‑M1/76‑90 (MQ=255)
              ataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAgg                                                                            <  1:113581‑M1/16‑1 (MQ=255)
                tgctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGct                                                                          <  2:2123827‑M1/90‑3 (MQ=255)
                  gcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCa                                                                        >  2:2860493‑M1/71‑90 (MQ=255)
                  ctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctct                                                                        <  1:3002337‑M1/90‑5 (MQ=255)
                  ctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctct                                                                        >  1:276716‑M1/1‑86 (MQ=255)
                  ctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCa                                                                        >  1:2759413/1‑90 (MQ=255)
                    gTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCaaa                                                                      <  2:2024505/90‑1 (MQ=255)
                     ttAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCaaaa                                                                     <  1:2957606/90‑1 (MQ=255)
                         gCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattac                                                                 >  2:1033322‑M1/1‑79 (MQ=255)
                         gCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCa                                                                 <  1:2176325/90‑1 (MQ=255)
                         aaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCa                                                                 >  2:1283933‑M1/64‑90 (MQ=255)
                          aatccccctggtaaaagcaagaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCaa                                                                >  1:3407178‑M1/63‑90 (MQ=255)
                            gCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctg                                                              <  1:1805987‑M1/90‑15 (MQ=255)
                             cAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATgc                                                             <  1:1526482/90‑1 (MQ=255)
                              aaGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgtt                                                            >  2:779762‑M1/1‑74 (MQ=255)
                                gAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATgcagc                                                          >  1:2487348/1‑90 (MQ=255)
                                cctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATgcagc                                                          <  1:3485729‑M1/34‑1 (MQ=255)
                                 aaTCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATgcagca                                                         <  2:1915206/90‑1 (MQ=255)
                                   tCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgt                                                       >  2:685861‑M1/1‑69 (MQ=255)
                                    gtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACg                                                      >  2:3450168‑M1/53‑90 (MQ=255)
                                    gtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACg                                                      >  1:690718‑M1/53‑90 (MQ=255)
                                     taaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACgg                                                     <  2:1428213‑M1/39‑1 (MQ=255)
                                     taaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACgg                                                     >  1:1306638‑M1/52‑90 (MQ=255)
                                     cGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcc                                                     >  1:1018961‑M1/1‑67 (MQ=255)
                                      aaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGc                                                    <  2:1628888‑M1/40‑1 (MQ=255)
                                      aaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGc                                                    <  1:3370150‑M1/40‑1 (MQ=255)
                                        ttGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccgg                                                  <  1:1820494‑M1/90‑27 (MQ=255)
                                            aggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAtt                                              <  2:2517509‑M1/46‑1 (MQ=255)
                                              atatCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgt                                            >  1:261777‑M1/1‑58 (MQ=255)
                                               aatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAgg                                           >  2:918829‑M1/42‑90 (MQ=255)
                                                atgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGa                                          >  2:587115‑M1/41‑90 (MQ=255)
                                                atCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtgg                                          >  2:1822291‑M1/1‑56 (MQ=255)
                                                 tgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGAc                                         >  1:264415‑M1/40‑90 (MQ=255)
                                                 tCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGAc                                         >  1:226279/1‑90 (MQ=255)
                                                  gatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACg                                        >  1:255174‑M1/39‑90 (MQ=255)
                                                   atgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGc                                       <  2:3275471‑M1/53‑1 (MQ=255)
                                                   atgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGc                                       <  2:232393‑M1/53‑1 (MQ=255)
                                                    aaTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggcctt                                      <  2:832587‑M1/90‑39 (MQ=255)
                                                         gATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagcc                                 >  2:157476‑M1/1‑47 (MQ=255)
                                                          aTGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagcca                                <  1:3179683‑M1/90‑45 (MQ=255)
                                                           tgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCGACGGCTACATTAGGACGCACCGGttt                               <  1:2391415‑M1/61‑1 (MQ=255)
                                                              cACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactcc                            <  1:2333792‑M1/90‑49 (MQ=255)
                                                               tgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATa                           >  1:956715‑M1/26‑90 (MQ=255)
                                                                gttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAg                          >  1:460254‑M1/25‑90 (MQ=255)
                                                                gttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAg                          <  2:2953443‑M1/66‑1 (MQ=255)
                                                                cTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAg                          <  1:2077279/90‑1 (MQ=255)
                                                                 ttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGc                         >  1:196661‑M1/24‑90 (MQ=255)
                                                                 tgtgCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgcc                         >  1:103917‑M1/1‑39 (MQ=255)
                                                                   atttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCta                       <  1:2162792‑M1/69‑1 (MQ=255)
                                                                    tttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCtat                      <  1:835701‑M1/70‑1 (MQ=255)
                                                                    tttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCtat                      <  1:1692424‑M1/70‑1 (MQ=255)
                                                                     cAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaaca                     >  2:1181265‑M1/1‑35 (MQ=255)
                                                                      aaaCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacag                    >  1:549406‑M1/1‑34 (MQ=255)
                                                                       cttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATAcc                   >  1:2665782‑M1/18‑90 (MQ=255)
                                                                        ttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCg                  >  2:2761383‑M1/17‑90 (MQ=255)
                                                                          ggCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttcggtggccttcagccactccgccaacaggctg                <  1:254514‑M1/90‑61 (MQ=255)
                                                                           gCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggcctccagccactccgccaacaggctgg               <  2:568251‑M1/90‑62 (MQ=255)
                                                                             tttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTAt             <  2:2611603‑M1/79‑1 (MQ=255)
                                                                              ctcGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctg            >  1:2583418‑M1/1‑26 (MQ=255)
                                                                               tcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGa           >  2:3108665‑M1/10‑90 (MQ=255)
                                                                               tcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGa           >  1:1652232‑M1/10‑90 (MQ=255)
                                                                                cataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGAt          <  1:894052‑M1/82‑1 (MQ=255)
                                                                                cataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGAt          >  2:3214528‑M1/9‑90 (MQ=255)
                                                                                cataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGAt          >  2:1091645‑M1/9‑90 (MQ=255)
                                                                                cGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGAt          <  1:2285173/90‑1 (MQ=255)
                                                                                 ataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGAtt         <  2:2575575‑M1/83‑1 (MQ=255)
                                                                                 ataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATAAtt         >  1:1339556‑M1/8‑90 (MQ=255)
                                                                                  aaaaCCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaat        >  1:3350228‑M1/1‑22 (MQ=255)
                                                                                  aaaaCCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaat        >  1:1356432‑M1/1‑22 (MQ=255)
                                                                                    aacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggt      >  2:978719‑M1/5‑90 (MQ=255)
                                                                                     acgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggtg     <  1:1921491‑M1/87‑1 (MQ=255)
                                                                                      cgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggtgg    <  1:3199359‑M1/88‑1 (MQ=255)
                                                                                      cgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggtgg    <  1:1367241‑M1/88‑1 (MQ=255)
                                                                                      ccTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaa    >  2:3066702‑M1/1‑18 (MQ=255)
                                                                                       gTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTggtggt   <  1:1746820‑M1/89‑1 (MQ=255)
                                                                                       gTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTggtggt   >  2:1698042‑M1/2‑90 (MQ=255)
                                                                                        ttGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatg  >  1:908384‑M1/1‑16 (MQ=255)
                                                                                        |                                                                                         
ACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTA  >  AC_000091/1209279‑1209456

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.