| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | AC_000091 | 2,320,795 | Δ1,336 bp | insD–[rcsC] | insD, insC, [rcsC] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | AC_000091 | 2320795–2322125 | 2322130 | 6–1336 | 139 [0] | [0] 141 | insD–[rcsC] | insD,insC,[rcsC] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AC_000091 | = 2320794 | 0 (0.000) | 129 (1.030) | 89/166 | 0.2 | 100% | intergenic (‑59/+11) | rcsC/insD | hybrid sensory kinase in two‑component regulatory system with RcsB and YojN/IS2 element protein |
| ? | AC_000091 | 2322131 = | 0 (0.000) | coding (2368/2424 nt) | rcsC | hybrid sensory kinase in two‑component regulatory system with RcsB and YojN | |||||
Only 100 of 141 total aligned reads displayed.
CAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAGATCGTCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTCATGCGGAGCAGCCACACTGTGTACCCACTCCCCTGGCGCTT > AC_000091/2322042‑2322220 | aatcggatgatcatccacgaccagaatcatcatatcgtcattatcgctgaccgctttgtccgttgacggcagagcgttagcaggatcgtc < 2:3070265‑M2/1‑1 (MQ=255) cggatgatcatccacgaccagaatcatcatatcgtcattatcgctgaccgctttgtccgttgacggcagagcgttagcaggatcgtCGct < 2:1075148‑M2/4‑1 (MQ=255) ggatgatcatccacgaccagaatcatcatatcgtcattatcgctgaccgctttgtccgttgacggcagagcgttagcaggatcgtCGctc < 1:2968227‑M2/5‑1 (MQ=255) ggatgatcatccacgaccagaatcatcatatcgtcattatcgctgaccgctttgtccgttgacggcagagcgttagcaggatcgtCGctc < 1:3413876‑M2/5‑1 (MQ=255) gatgatcatccacgaccagaatcatcatatcgtcattatcgctgaccgctttgtccgttgacggcagagcgttagcaggatcgtCGctct < 2:1332599‑M2/6‑1 (MQ=255) atcatccacgaccagaatcatcatatcgtcattatcgctgaccgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCAt > 1:182399‑M2/81‑90 (MQ=255) catccacgaccagaatcatcatatcgtcattatcgctgaccgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCAtct > 1:1027024‑M2/79‑90 (MQ=255) catccacgaccagaatcatcatatcgtcattatcgctgaccgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCAtct < 1:2555866‑M2/12‑1 (MQ=255) catccacgaccagaatcatcatatcgtcattatcgctgaccgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCAtct < 2:2061173‑M2/12‑1 (MQ=255) atccacgaccagaatcatcatatcgtcattatcgctgaccgctttgtccgttgacggcagagcgttggcaggatcgtCGCTCTCCAtctc > 2:487674‑M2/78‑90 (MQ=255) atacacaaccagaatcatcatatcgtcattatcgctgaccgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCAtctc > 2:3003956‑M2/78‑90 (MQ=255) acgaccagaatcatcatatcgtcattatcgctgaccgctttgtccgttgacggcagagcgttagcaggatcctCGCTCTCCATCTCGATc > 1:1262012‑M2/74‑90 (MQ=255) cgaccagaatcatcatatcgtcattatcgctgaccgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCa < 1:574175‑M2/18‑1 (MQ=255) cgaccagaatcatcatatcgtcattatcgctgaccgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCa > 2:628600‑M2/73‑90 (MQ=255) cgaccagaatcatcatatcgtcattatcgctgaccgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCa < 1:276573‑M2/18‑1 (MQ=255) cgaccagaatcatcatatcgtcattatcgctgaccgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCa > 2:2591653‑M2/73‑90 (MQ=255) ccagaatcatcatatcgtcattatcgctgaccgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCaaat > 2:240218‑M2/70‑90 (MQ=255) cagaatcatcatatcgtcattatcgctgaccgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCaaata > 1:1349482‑M2/69‑90 (MQ=255) agaatcatcatatcgtcattatcgctgaccgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCaaataa > 2:1029907‑M2/68‑90 (MQ=255) gaatcatcatatcgtcattatcgctgaccgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCaaataaa < 2:2162514‑M2/24‑1 (MQ=255) gaatcatcatatcgtcattatcgctgaccgctttgtccgttgacggcagagcgatagcaggatcgtCGCTCTCCATCTCGATCaaataaa > 2:1539308‑M2/67‑90 (MQ=255) aatcatcatatcgtcattatcgctgaccgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCaaataaat < 1:3209292‑M2/25‑1 (MQ=255) catcatatcgtcattatcgctgaccgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATAcg > 2:1569295‑M2/63‑90 (MQ=255) catcatatcgtcattatcgctgaccgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATAcg < 1:1624814‑M2/28‑1 (MQ=255) catcatatcgtcattatcgctgaccgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATAcg < 1:626216‑M2/28‑1 (MQ=255) catcatatcgtcattatcgctgaccgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATAcg > 1:2009583‑M2/63‑90 (MQ=255) atcatatagtcattatcgctgaccgctttgtccggtgacggcagagcgttagcaggatcgtCGCTCTCCCTCTCGATCAAATAAATAcgc > 2:1954739‑M2/62‑90 (MQ=255) tcatatcgtcattatcgctgaccgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATAtgcg > 1:3370193‑M2/61‑90 (MQ=255) tcatatcgtcattatcgctgaccgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATAcgcg < 2:141208‑M2/30‑1 (MQ=255) atatcgtcattatcgctgaccgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGcc < 1:1146293‑M2/32‑1 (MQ=255) atatcgtcattatcgctgaccgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGcc < 1:2733562‑M2/32‑1 (MQ=255) atatcgtcattatcgctgaccgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGcc > 1:2469892‑M2/59‑90 (MQ=255) tatcgtcattatcgctgaccgctttgtccgttgacggcagagcgttagcaggatcgtCTCTCTCCATCTCGATCAAATAAATACGCGCca > 1:1535173‑M2/58‑90 (MQ=255) atcgtcattatcgctgaccgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCcaa > 2:327999‑M2/57‑90 (MQ=255) tcgtcattatcgctgaccgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCcaac < 2:2262022‑M2/35‑1 (MQ=255) cgtcattatcgctgaccgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCcaaca < 2:2221095‑M2/36‑1 (MQ=255) cgtcattatcgctgaccgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCcaaca > 2:1200249‑M2/55‑90 (MQ=255) gtcattatcgctgaccgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCcaacaa < 2:19845‑M2/37‑1 (MQ=255) tcattatcgctgaccgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAAt < 1:2420898‑M2/38‑1 (MQ=255) cattatcgctgaccgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATg > 2:3349886‑M2/52‑90 (MQ=255) attatcgctgaccgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGc > 1:2010760‑M2/51‑90 (MQ=255) ttatcgctgaccgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGcc < 1:2590581‑M2/41‑1 (MQ=255) ttatcgctgaccgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGcc > 1:2937682‑M2/50‑90 (MQ=255) tatcgctgaccgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCg < 1:2263336‑M2/42‑1 (MQ=255) tcgctgaccgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGt < 2:1857155‑M2/44‑1 (MQ=255) cgctgaccgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTa < 1:2288404‑M2/45‑1 (MQ=255) gctgaccgctttgtccgttgacggcagagcgttagcaggctcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAg < 1:81719‑M2/46‑1 (MQ=255) gctgaccgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGtaa > 2:3316618‑M2/45‑89 (MQ=255) tgaccgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCTTCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCt < 2:1331923‑M2/48‑1 (MQ=255) tgaccgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCt > 1:2950428‑M2/43‑90 (MQ=255) tgaccgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCt > 2:1657146‑M2/43‑90 (MQ=255) gaccgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTc < 2:1195341‑M2/49‑1 (MQ=255) gaccgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTc < 1:723310‑M2/49‑1 (MQ=255) gaccgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTc < 1:665871‑M2/49‑1 (MQ=255) cgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTCATg < 2:2176118‑M2/52‑1 (MQ=255) cgctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAAAACGCGCCAACAATGCCGGTAGATCATg > 2:742705‑M2/39‑90 (MQ=255) gctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTCATGc < 2:835222‑M2/53‑1 (MQ=255) gctttgtccgttgacggcagagcgttagcaggatcgcCGCTCTCCATCTAGATCAAATAAATACGCGCCAACCATGCCGGTAGCTCAGGc > 2:2616529‑M2/38‑90 (MQ=255) ctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTCATGCg > 2:2622946‑M2/37‑90 (MQ=255) ctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTCATGCg < 1:1036667‑M2/54‑1 (MQ=255) ctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTCATGCg < 2:2714124‑M2/54‑1 (MQ=255) ctttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAAGGCCGGTAGCTCATGCg > 1:929097‑M2/37‑90 (MQ=255) tttgtccgttgacggcagagcgttagcatgatcttCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTCATGCgg < 1:665157‑M2/55‑1 (MQ=255) ttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTCATGCGGa > 1:201216‑M2/35‑90 (MQ=255) ttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTCATGCGGa > 1:525942‑M2/35‑90 (MQ=255) ttgtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTCATGCGGa > 1:2173577‑M2/35‑90 (MQ=255) gtccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTCATGCGGagc > 1:1538077‑M2/33‑90 (MQ=255) ccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTCATGCGGagcag > 2:474819‑M2/31‑90 (MQ=255) ccgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTCATGCGGagcag > 2:1464959‑M2/31‑90 (MQ=255) cgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTCATGCGGagcagc < 1:1951668‑M2/61‑1 (MQ=255) cgttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTCATGCGGagcagc > 2:2913648‑M2/30‑90 (MQ=255) gttgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTCATGCGGAGCAGcc < 2:1930465‑M2/62‑1 (MQ=255) gttgacggcagagcgttagcaggatcgtCGCTCGCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTCATGCGGAGCAGcc > 2:517886‑M2/29‑90 (MQ=255) tgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCTAACAATGCCGGTAGCTCATGCGGAGCAGCcac > 2:2711865‑M2/27‑90 (MQ=255) tgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTCATGCGGAGCAGCcac > 2:1187569‑M2/27‑90 (MQ=255) tgacggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTCATGCGGAGCAGCcac > 1:1351454‑M2/27‑90 (MQ=255) acggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTCATGCGGAGCAGCCacac < 2:2047135‑M2/66‑1 (MQ=255) cggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTCATGCGGAGCAGCCACACt > 1:998791‑M2/24‑90 (MQ=255) cggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTCATGCGGAGCAGCCACACt < 1:2429644‑M2/67‑1 (MQ=255) ggcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTCATGCGGAGCAGCCACACtg > 2:299190‑M2/23‑90 (MQ=255) gcagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTCATGCGGAGCAGCCACGCtgt > 2:2203853‑M2/22‑90 (MQ=255) cagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTCATGCGGAGCAGCCACACtgtg < 1:2624850‑M2/70‑1 (MQ=255) cagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTCATGCGGAGCAGCCACACtgtg > 2:3090716‑M2/21‑90 (MQ=255) cagagcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTCATGCGGAGCAGCCACACtgtg > 1:1232063‑M2/21‑90 (MQ=255) agcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTCATGCGGAGCAGCCACACTGTGTAc > 1:1380316‑M2/18‑90 (MQ=255) agcgttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTCATGCGGAGCAGCCACACTGTGTAc < 2:2907617‑M2/73‑1 (MQ=255) gttagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTCATGCGGAGCAGCCACACTGTGTACCCa > 2:2143970‑M2/15‑90 (MQ=255) tagcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTCATGCGGAGCAGCCACACTGTGTACCCACt < 1:1740679‑M2/78‑1 (MQ=255) gcaggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTCATGCGGAGCAGCCACACTGTGTACCCACTcc < 2:2353502‑M2/80‑1 (MQ=255) ggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCACCAATGCCGGTAGCTCATGCGGAGCAGCCACACTGTGTACCCACTCCCCt < 2:2994131‑M2/83‑1 (MQ=255) ggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTCATGCGGAGCAGCCACACTGTGTACCCACTCCCCt < 2:1853769‑M2/83‑1 (MQ=255) ggatcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTCATGCGGAGCAGCCACACTGTGTACCCACTCCCCt < 2:3433043‑M2/83‑1 (MQ=255) atcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTCATGCGGAGCAGCCACACTGTGTACCCACTCCCCTgg < 2:1941167‑M2/85‑1 (MQ=255) atcgtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTCATGCGGAGCAGCCACACTGTGTACCCACTCCCCTgg < 2:1940601‑M2/85‑1 (MQ=255) gtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTCATGCGGAGCAGCCACACTGTGTACCCACTCCCCTGgcgc > 2:362355‑M2/3‑90 (MQ=255) gtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTCATGCGGAGCAGCCACACTGTGTACCCACTCCCCTGgcgc > 1:2834543‑M2/3‑90 (MQ=255) gtCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTCATGCGGAGCAGCCACACTGTGTACCCACTCCCCTGgcgc > 1:952752‑M2/3‑90 (MQ=255) tCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTCATGCGGAGCAGCCACACTGTGTACCCACTCCCCTGGCGCt > 1:1691986‑M2/2‑90 (MQ=255) tCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTCATGCGGAGCAGCCACACTGTGTACCCACTCCCCTGGCGCt > 1:2108795‑M2/2‑90 (MQ=255) tCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTCATGCGGAGCAGCCACACTGTGTACCCACTCCCCTGGCGCt > 2:558331‑M2/2‑90 (MQ=255) | CAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAGATCGTCGCTCTCCATCTCGATCAAATAAATACGCGCCAACAATGCCGGTAGCTCATGCGGAGCAGCCACACTGTGTACCCACTCCCCTGGCGCTT > AC_000091/2322042‑2322220 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |