BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	AC_000091	4,357,741	A→G	L52L (TTA→TTG)	yjdO →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	AC_000091	4,357,741	0	A	G	100.0%	482.1 / NA	121	L52L (TTA→TTG)	yjdO	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (56/65); total (56/65)

Only 100 of 122 total aligned reads displayed.

TTTATCTCACATGAGAAAACACATATTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTACTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTG  >  AC_000091/4357655‑4357825

tttATCTCACATGAGAAAACACATATTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCtt                                                                                   >  1:2892210/1‑90 (MQ=255)

tttATCTCACATGAGAAAACACATATTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCtt                                                                                   >  2:2837443/1‑90 (MQ=255)

tttATCTCACATGAGAAAACACATATTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCtt                                                                                   >  1:1281768/1‑90 (MQ=255)

 ttATCTCACATGAGAAAACACATATTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCttt                                                                                  >  2:2795142/1‑90 (MQ=255)

 ttATCTCACATGAGAAAACACATATTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCttt                                                                                  <  1:2213957/90‑1 (MQ=255)

  tATCTCACATGAGAAAACACATATTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCtttt                                                                                 <  1:697579/90‑1 (MQ=255)

   aTCTCACATGCGAAAGCATATATTCGTTTACTGAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCttttt                                                                                >  2:1293914/1‑90 (MQ=255)

    tctcACATGAGAAAACACATATTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCtttttt                                                                               <  1:357016/90‑1 (MQ=255)

     ctcACATGAGAAAACACATATTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTtc                                                                              >  2:2191219/1‑90 (MQ=255)

     ctcACATGAGAAAACACATATTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTtc                                                                              <  1:3012133/90‑1 (MQ=255)

      tcACATGAGAAAACACATATTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTtct                                                                             <  2:3396762/90‑1 (MQ=255)

      tcACATGAGAAAACACATATTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTtct                                                                             <  1:2076117/90‑1 (MQ=255)

        acaTGAGAAAACACATATTCGTTTACTTAGTGCATTCCTGGTCGGAATACCCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTtctct                                                                           <  2:3479888/90‑1 (MQ=255)

        acaTGAGAAAACACATATTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTtctct                                                                           >  1:220299/1‑90 (MQ=255)

        acaTGAGAAAACACATATTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTtctct                                                                           <  1:1394670/90‑1 (MQ=255)

        acaTGAGAAAACACATATTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTtctct                                                                           <  1:2212626/90‑1 (MQ=255)

         caTGAGAAAACACATATTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTtctctc                                                                          >  1:2141611/1‑90 (MQ=255)

         caTGAGAAAACACATATTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTtctctc                                                                          <  1:2462578/90‑1 (MQ=255)

         caTGAGAAAACACATATTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTtctctc                                                                          <  2:2655085/90‑1 (MQ=255)

           tGAGAAAACACATATTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCtt                                                                        <  1:354613/90‑1 (MQ=255)

            gagaAAACACATATTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCttt                                                                       <  1:3050834/90‑1 (MQ=255)

            gagaAAACACATATTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCttt                                                                       >  2:2900413/1‑90 (MQ=255)

            gagaAAACACATATTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCttt                                                                       <  1:1121298/90‑1 (MQ=255)

            gagaAAACACATATTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCttt                                                                       <  1:1259405/90‑1 (MQ=255)

             agaAAACACATATTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCtttt                                                                      <  2:2306180/90‑1 (MQ=255)

              gaAAACACATATTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTa                                                                     >  2:1921899/1‑90 (MQ=255)

              gaAAACACATATTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTa                                                                     <  1:1178175/90‑1 (MQ=255)

                aaaCACATATTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAgg                                                                   <  1:2074955/90‑1 (MQ=255)

                aaaCACATATTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAgg                                                                   >  2:1194456/1‑90 (MQ=255)

                aaaCACATATTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAgg                                                                   <  1:2784891/90‑1 (MQ=255)

                 aaCACATATTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGa                                                                  >  2:2754633/1‑90 (MQ=255)

                 aaCACATATTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGa                                                                  >  2:1735568/1‑90 (MQ=255)

                 aaCACATATTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGa                                                                  <  1:917915/90‑1 (MQ=255)

                 aaCACATATTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGa                                                                  >  1:2623131/1‑90 (MQ=255)

                  acacATATTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAg                                                                 >  1:3025770/1‑90 (MQ=255)

                    acaTATTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCt                                                               <  1:1606194/90‑1 (MQ=255)

                    acaTATTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCt                                                               <  1:550318/90‑1 (MQ=255)

                     caTATTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTg                                                              >  2:1159673/1‑90 (MQ=255)

                     caTATTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTg                                                              <  1:2516351/90‑1 (MQ=255)

                      atatTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGt                                                             >  1:2766234/1‑90 (MQ=255)

                      atatTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGt                                                             <  2:3044791/90‑1 (MQ=255)

                       tatTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTa                                                            >  2:3256384/1‑90 (MQ=255)

                        atTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAg                                                           <  2:2283226/90‑1 (MQ=255)

                          tCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGtt                                                         <  2:795584/90‑1 (MQ=255)

                           cGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTg                                                        >  1:1950336/1‑90 (MQ=255)

                           cGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTg                                                        <  2:2422312/90‑1 (MQ=255)

                               tACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTg                                                    <  2:980735/90‑1 (MQ=255)

                               tACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTg                                                    >  1:2387232/1‑90 (MQ=255)

                                aCTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTCGGAGCTGTAGTTGAGTgg                                                   >  1:1773039/1‑90 (MQ=255)

                                aCTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTgg                                                   <  2:1546732/90‑1 (MQ=255)

                                aCTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTgg                                                   <  1:2676482/90‑1 (MQ=255)

                                   tAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGAcc                                                >  1:1531567/1‑90 (MQ=255)

                                   tAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGAcc                                                >  1:2164485/1‑90 (MQ=255)

                                    aGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGAccc                                               <  2:665318/90‑1 (MQ=255)

                                    aGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGAccc                                               >  1:2339322/1‑90 (MQ=255)

                                      tGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGc                                             >  1:1868325/1‑90 (MQ=255)

                                       gCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCt                                            <  1:581914/90‑1 (MQ=255)

                                       gCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCt                                            >  1:749481/1‑90 (MQ=255)

                                        cATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTg                                           <  1:2602798/90‑1 (MQ=255)

                                         aTTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTgg                                          >  2:1972886/1‑90 (MQ=255)

                                         aTTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTgg                                          >  1:998259/1‑90 (MQ=255)

                                          ttCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGt                                         >  2:501481/1‑90 (MQ=255)

                                           tCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGtt                                        >  1:1417647/1‑90 (MQ=255)

                                             cTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTAt                                      >  1:2010037/1‑90 (MQ=255)

                                             cTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTAt                                      >  1:3135650/1‑90 (MQ=255)

                                             cTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTAt                                      <  2:286007/90‑1 (MQ=255)

                                              tGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATc                                     <  1:3363289/90‑1 (MQ=255)

                                               ggTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCg                                    >  1:275911/1‑90 (MQ=255)

                                               ggTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCg                                    >  2:867419/1‑90 (MQ=255)

                                                gTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGt                                   <  1:46643/90‑1 (MQ=255)

                                                 tCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTg                                  <  2:681913/90‑1 (MQ=255)

                                                     aaTAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAAc                              >  1:2412824/1‑90 (MQ=255)

                                                     aaTAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAAc                              >  1:695136/1‑90 (MQ=255)

                                                     aaTAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAAc                              <  1:2955510/90‑1 (MQ=255)

                                                       tAACCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGa                            <  2:1478747/90‑1 (MQ=255)

                                                        aaCCTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGaa                           <  2:1037639/90‑1 (MQ=255)

                                                          ccTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGc                         >  1:1482179/1‑90 (MQ=255)

                                                          ccTGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGc                         <  1:2530014/90‑1 (MQ=255)

                                                            tGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGt                       >  1:3002161/1‑90 (MQ=255)

                                                            tGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGt                       >  1:2059474/1‑90 (MQ=255)

                                                            tGGCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGCGGACCCGCTGGTTATCGTGAAACGAAGCGt                       >  2:713098/1‑90 (MQ=255)

                                                             ggCCAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGtc                      <  2:892907/90‑1 (MQ=255)

                                                               ccAATGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGtctc                    <  2:1388512/90‑1 (MQ=255)

                                                                   tGAGTCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTctcct                <  1:1123193/90‑1 (MQ=255)

                                                                       tCTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCaaa            <  1:176927/90‑1 (MQ=255)

                                                                        cTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCaaaa           <  2:247213/90‑1 (MQ=255)

                                                                        cTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCaaaa           >  2:1462768/1‑90 (MQ=255)

                                                                        cTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCaaaa           >  1:3340215/1‑90 (MQ=255)

                                                                        cTGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCaaaa           <  1:2471282/90‑1 (MQ=255)

                                                                         tGCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAAc          <  1:875536/90‑1 (MQ=255)

                                                                          gCCTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACt         >  1:1168038/1‑90 (MQ=255)

                                                                           ccTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTg        >  1:1515625/1‑90 (MQ=255)

                                                                           ccTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTg        >  1:1243547/1‑90 (MQ=255)

                                                                            cTGTGGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTgg       >  2:2270259/1‑90 (MQ=255)

                                                                             tgtgGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGa      <  1:346327/90‑1 (MQ=255)

                                                                              gtgGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGAt     <  1:3464764/90‑1 (MQ=255)

                                                                               tgGCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGAtt    <  2:3195879/90‑1 (MQ=255)

                                                                                ggCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGAttt   <  1:2747756/90‑1 (MQ=255)

                                                                                ggCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGAttt   <  1:1431167/90‑1 (MQ=255)

                                                                                 gCATTGCTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTg  <  2:2411041/90‑1 (MQ=255)

TTTATCTCACATGAGAAAACACATATTCGTTTACTTAGTGCATTCCTGGTCGGAATAACCTGGCCAATGAGTCTGCCTGTGGCATTACTTTTTTCTCTCTTTTAGGAGCTGTAGTTGAGTGGACCCGCTGGTTATCGTGAAACGAAGCGTCTCTCCTCAAAACTGGATTTG  >  AC_000091/4357655‑4357825

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`