BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	AC_000091	395,812	C→T	intergenic (‑301/‑51)	ampH ← / → sbmA	beta‑lactamase/D‑alanine carboxypeptidase/predicted transporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	AC_000091	395,812	0	C	T	100.0%	546.9 / NA	136	intergenic (‑301/‑51)	ampH/sbmA	beta‑lactamase/D‑alanine carboxypeptidase/predicted transporter
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (45/91); total (45/91)

Only 100 of 137 total aligned reads displayed.

TCTTATGGTCAGGCTGGCGAACTAAGCGCCTTGCTATGGGTCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGCGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATGTTTAAGTCTTTTTTCCCAAAGCCGGGAACGTTT  >  AC_000091/395727‑395898

tCTTATGGTCAGGCTGGCGAACTAAGCGCCTTGCTATGGGTCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGtt                                                                                    <  2:3467414/90‑1 (MQ=255)

  ttATGGTCAGGCTGGCGAACTAAGCGCCTTGCTATGGGTCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTaa                                                                                  <  2:1525110/90‑1 (MQ=255)

   tATGGTCAGGCTGGCGAACTAAGCGCCTTGCTATGGGTCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAAt                                                                                 >  1:210380/1‑90 (MQ=255)

   tATGGTCAGGCTGGCGAACTAAGCGCCTTGCTATGGGTCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGGTAAt                                                                                 >  2:1803651/1‑90 (MQ=255)

     tGGTCAGGCTGGCGAACTAAGCGCCTTGCTATGGGTCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATac                                                                               >  2:1239999/1‑90 (MQ=255)

     tGGTCAGGCTGGCGAACTAAGCGCCTTGCTATGGGTCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATac                                                                               <  2:1757297/90‑1 (MQ=255)

        tCAGGCTGGCGAACTAAGCGCCTTGCTATGGGTCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATAcaca                                                                            <  2:1183016/90‑1 (MQ=255)

        tCAGGCTGGCGAACTAAGCGCCTTGCTATGGGTCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATAcaca                                                                            <  1:1776463/90‑1 (MQ=255)

         cAGGCTGGCGAACTAAGCGCCTTGCTATGGGTCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACAcag                                                                           >  1:1325400/1‑90 (MQ=255)

         cAGGCTGGCGAACTAAGCGCCTTGCTATGGGTCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACAcag                                                                           <  2:256321/90‑1 (MQ=255)

         cAGGCTGGCGAACTAAGCGCCTTGCTATGGGTCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACAcag                                                                           >  2:1565896/1‑90 (MQ=255)

          aGGCTGGCGAACTAAGCGCCTTGCTATGGGTCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACAcagc                                                                          >  1:383953/1‑90 (MQ=255)

            gCTGGCGAACTAAGCGCCTTGCTATGGGTCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACAcagcag                                                                        <  2:807548/90‑1 (MQ=255)

              tGGCGAACTAAGCGCCTTGCTATGGGTCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAgtt                                                                      <  2:2483864/90‑1 (MQ=255)

              tGGCGAACTAAGCGCCTTGCTATGGGTCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAgtt                                                                      <  1:231221/90‑1 (MQ=255)

                gCGAACTAAGCGCCTTGCTATGGGTCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAgttgt                                                                    <  2:2078219/90‑1 (MQ=255)

                 cGAACTAAGCGCCTTGCTATGGGTCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAgttgtt                                                                   <  1:3068988/90‑1 (MQ=255)

                    aCTAAGCGCCTTGCTATGGGTCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTaaa                                                                >  1:1602816/1‑90 (MQ=255)

                     cTAAGCGCCTTGCTATGGGTCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACTCAGCAGTTGTTaaaa                                                               <  2:3080872/90‑1 (MQ=255)

                     cTAAGCGCCTTGCTATGGGTCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTaaaa                                                               >  1:1465697/1‑90 (MQ=255)

                     cTAAGCGCCTTGCTATGGGTCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTaaaa                                                               <  2:832119/90‑1 (MQ=255)

                      tAAGCGCCTTGCTATGGGTCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAAc                                                              <  2:1008633/90‑1 (MQ=255)

                         gcgcCTTGCTATGGGTCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGAt                                                           <  1:132909/90‑1 (MQ=255)

                         gcgcCTTGCTATGGGTCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGAt                                                           <  1:3014829/90‑1 (MQ=255)

                            ccTTGCTATGGGTCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATaag                                                        <  1:1711781/90‑1 (MQ=255)

                             cTTGCTATGGGTCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATaaga                                                       >  1:1710837/1‑90 (MQ=255)

                             cTTGCTATGGGTCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATaaga                                                       <  1:1401150/90‑1 (MQ=255)

                               tGCTATGGGTCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATaagaag                                                     <  2:1670461/90‑1 (MQ=255)

                                gCTATGGGTCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAGCGATAAGAAGt                                                    >  2:145830/1‑90 (MQ=255)

                                 cTATGGGTCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGtt                                                   >  1:1417687/1‑90 (MQ=255)

                                 cTATGGGTCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGtt                                                   >  1:2411084/1‑90 (MQ=255)

                                  tATGGGTCCCAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTa                                                  <  2:934406/90‑1 (MQ=255)

                                  tATGGGTCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTa                                                  <  2:2387316/90‑1 (MQ=255)

                                  tATGGGTCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTa                                                  <  2:2617403/90‑1 (MQ=255)

                                   aTGGGTCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAg                                                 <  2:2939741/90‑1 (MQ=255)

                                    tGGGTCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGc                                                >  1:2523045/1‑90 (MQ=255)

                                      ggTCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAg                                              <  1:2697192/90‑1 (MQ=255)

                                      ggTCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAg                                              <  1:3300363/90‑1 (MQ=255)

                                      ggTCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAg                                              <  1:62149/90‑1 (MQ=255)

                                       gTCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAgg                                             >  2:2265238/1‑90 (MQ=255)

                                        tCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGa                                            <  1:370198/90‑1 (MQ=255)

                                        tCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGa                                            <  1:1510910/90‑1 (MQ=255)

                                        tCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGa                                            >  2:1670802/1‑90 (MQ=255)

                                         cacaATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAg                                           >  2:2101904/1‑90 (MQ=255)

                                          acaATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGt                                          >  2:807629/1‑90 (MQ=255)

                                          acaATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGt                                          <  1:254434/90‑1 (MQ=255)

                                          acaATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGt                                          <  2:1981792/90‑1 (MQ=255)

                                           caATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTg                                         <  2:2602478/90‑1 (MQ=255)

                                             aTGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCa                                       <  1:2966107/90‑1 (MQ=255)

                                               gggCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCata                                     <  2:1034882/90‑1 (MQ=255)

                                               gggCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCata                                     <  2:766883/90‑1 (MQ=255)

                                               gggCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCata                                     >  2:158961/1‑90 (MQ=255)

                                                 gCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATg                                   <  1:231523/90‑1 (MQ=255)

                                                 gCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATg                                   >  1:2976905/1‑90 (MQ=255)

                                                 gCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATg                                   <  2:55158/90‑1 (MQ=255)

                                                   ggTTTCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATGtt                                 >  2:396755/1‑90 (MQ=255)

                                                      ttCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATGTTTaa                              <  2:274392/90‑1 (MQ=255)

                                                      ttCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATGTTTaa                              <  1:1575411/90‑1 (MQ=255)

                                                       tCATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATGTTTAAg                             <  2:2834147/90‑1 (MQ=255)

                                                        cATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATGTTTAAGt                            <  2:585070/90‑1 (MQ=255)

                                                        cATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATGTTTAAGt                            <  2:2536661/90‑1 (MQ=255)

                                                        cATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATGTTTAAGt                            <  1:2582451/90‑1 (MQ=255)

                                                        cATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATGTTTAAGt                            <  1:2961648/90‑1 (MQ=255)

                                                        cATTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTACCAGGAGTGCATATGTTTAGGt                            <  2:2127334/90‑1 (MQ=255)

                                                         aTTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATGTTTAAGTc                           <  1:2041962/90‑1 (MQ=255)

                                                         aTTTGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATGTTTAAGTc                           >  1:248972/1‑90 (MQ=255)

                                                          tttGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATGTTTAAGTCt                          <  1:1091330/90‑1 (MQ=255)

                                                          tttGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATGTTTAAGTCt                          <  2:3402042/90‑1 (MQ=255)

                                                           ttGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATGTTTAAGTCtt                         <  2:1898114/90‑1 (MQ=255)

                                                            tGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATGTTTAAGTCttt                        <  1:1268879/90‑1 (MQ=255)

                                                            tGGCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATGTTTAAGTCttt                        <  2:2032485/90‑1 (MQ=255)

                                                             ggCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATGTTTAAGTCtttt                       >  1:946072/1‑90 (MQ=255)

                                                             ggCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGCTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATGTTTAAGTCtttt                       <  2:2675424/90‑1 (MQ=255)

                                                              gCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATGTTTAAGTCttttt                      <  2:2044910/90‑1 (MQ=255)

                                                              gCTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATGTTTAAGTCttttt                      <  1:906529/90‑1 (MQ=255)

                                                               cTGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATGTTTAAGTCtttttt                     <  2:1149991/90‑1 (MQ=255)

                                                                tGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATGTTTAAGTCTTTTTTc                    >  2:2148040/1‑90 (MQ=255)

                                                                tGACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATGTTTAAGTCTTTTTTc                    <  1:2149764/90‑1 (MQ=255)

                                                                 gACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATGTTTAAGTCTTTTTTcc                   >  2:3466388/1‑90 (MQ=255)

                                                                 gACGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATGTTTAAGTCTTTTTTcc                   <  2:2735113/90‑1 (MQ=255)

                                                                   cGCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATGTTTAAGTCTTTTTTCCCa                 <  1:1830302/90‑1 (MQ=255)

                                                                    gCTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATGTTTAAGTCTTTTTTCCCaa                <  2:3248516/90‑1 (MQ=255)

                                                                     cTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTACAACGATAAGAAGTTAGCAGGAGTGCATATGTTTAAGTCTTTTTTCCCaaa               >  2:2962688/1‑90 (MQ=255)

                                                                     cTTTGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATGTTTAAGTCTTTTTTCCCaaa               <  1:3142305/90‑1 (MQ=255)

                                                                      tttGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATCTGTTTAAGTCTTTTTTCCCAAAg              >  2:2256428/1‑90 (MQ=255)

                                                                      tttGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATGTTTAAGTCTTTTTTCCCAAAg              <  2:438271/90‑1 (MQ=255)

                                                                       ttGTAGCGGTCATGTGGTTAATACACAGCAGTTGCTAAAACGATAAGAAGTTAGCAGGAGTGCATATGTTTAAGTCTTTTTTCCCAAAGc             <  2:746177/90‑1 (MQ=255)

                                                                        tGTAGCGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATGTTTAAGTCTTTTTTCCCAAAGcc            >  2:1216081/1‑90 (MQ=255)

                                                                             cGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATGTTTAAGTCTTTTTTCCCAAAGCCGGGaa       <  1:1038284/90‑1 (MQ=255)

                                                                             cGGTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATGTTTAAGTCTTTTTTCCCAAAGCCGGGaa       <  2:2136589/90‑1 (MQ=255)

                                                                              ggTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATGTTTAAGTCTTTTTTCCCAAAGCCGGGAAc      >  1:2877408/1‑90 (MQ=255)

                                                                              ggTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATGTTTAAGTCTTTTTTCCCAAAGCCGGGAAc      >  1:2221701/1‑90 (MQ=255)

                                                                              ggTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATGTTTAAGTCTTTTTTCCCAAAGCCGGGAAc      <  2:127767/90‑1 (MQ=255)

                                                                               gTCATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATGTTTAAGTCTTTTTTCCCAAAGCCGGGAACg     <  1:117930/90‑1 (MQ=255)

                                                                                 cATGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATGTTTAAGTCTTTTTTCCCAAAGCCGGGAACGtt   <  1:1873963/90‑1 (MQ=255)

                                                                                  aTGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATGTTTAAGTCTTTTTTCCCAAAGCCGGGAACGttt  >  1:2221936/1‑90 (MQ=255)

                                                                                  aTGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATGTTTAAGTCTTTTTTCCCAAAGCCGGGAACGttt  >  2:3086555/1‑90 (MQ=255)

                                                                                  aTGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATGTTTAAGTCTTTTTTCCCAAAGCCGGGAACGttt  >  1:3255479/1‑90 (MQ=255)

                                                                                  aTGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATGTTTAAGTCTTTTTTCCCAAAGCCGGGAACGttt  <  2:2843840/90‑1 (MQ=255)

                                                                                  aTGTGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATGTTTAAGTCTTTTTTCCCAAAGCCGGGAACGttt  <  2:2306938/90‑1 (MQ=255)

TCTTATGGTCAGGCTGGCGAACTAAGCGCCTTGCTATGGGTCACAATGGGCGGTTTCATTTGGCTGACGCTTTGTAGCGGTCATGCGGTTAATACACAGCAGTTGTTAAAACGATAAGAAGTTAGCAGGAGTGCATATGTTTAAGTCTTTTTTCCCAAAGCCGGGAACGTTT  >  AC_000091/395727‑395898

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`