BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	AC_000091	1,256,829	A→G	V234A (GTT→GCT)	ycgV ←	predicted adhesin

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	AC_000091	1,256,829	0	A	G	100.0%	505.1 / NA	129	V234A (GTT→GCT)	ycgV	predicted adhesin
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (73/56); total (73/56)

Only 100 of 129 total aligned reads displayed.

TCGCCATTGGTTTTAATGGTACTGTTTGTTCCGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAACATCGATTGTCAGGTCTGTAGCCGTAAAACGCGCAGCACCATTGGCGTTATTGCCGTTGAGACCACCGATATAAACACCTGTACTT  >  AC_000091/1256742‑1256915

tCGCCATTGGTTTTAATGGTACTGTTTGTTCCGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCa                                                                                      >  1:1221399/1‑90 (MQ=255)

 cGCCATTGGTTTTAATGGTACTGTTTGTTCCGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCAt                                                                                     >  1:863767/1‑90 (MQ=255)

 cGCCATTGGTTTTAATGGTACTGTTTGTTCCGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCAt                                                                                     >  1:3423119/1‑90 (MQ=255)

  gCCATTGGTTTTAATGGTACTGTTTGTTCCGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATc                                                                                    <  2:2468083/90‑1 (MQ=255)

  gCCATTGGTTTTAATGGTACTGTTTGTTCCGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATc                                                                                    <  2:1694017/90‑1 (MQ=255)

   ccATTGGTTTTAATGGTACTGTTTGTTCCGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCg                                                                                   >  2:2848982/1‑90 (MQ=255)

   ccATTGGTTTTAATGGTACTGTTTGTTCCGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCg                                                                                   >  1:1739506/1‑90 (MQ=255)

    cATTGGTTTTAATGGTACTGTTTGTTCCGAGATCGTCAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGa                                                                                  <  1:2666968/90‑1 (MQ=255)

    cATTGGTTTTAATGGTACTGTTTGTTCCGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGa                                                                                  <  1:3480527/90‑1 (MQ=255)

    cATTGGTTTTAATGGTACTGTTTGTTCCGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGa                                                                                  >  1:3478432/1‑90 (MQ=255)

     aTTGGTTTTAATGGTACTGTTTGTTCCGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGAt                                                                                 <  2:3122688/90‑1 (MQ=255)

     aTTGGTTTTAATGGTACTGTTTGTTCCGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGAt                                                                                 >  1:263241/1‑90 (MQ=255)

     aTTGGTTTTAATGGTACTGTTTGTTCCGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGAt                                                                                 >  1:2327581/1‑90 (MQ=255)

      ttGGTTTTAATGGTACTGTTTGTTCCGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGAtt                                                                                >  1:985770/1‑90 (MQ=255)

      ttGGTTTTAATGGTACTGTTTGTTCCGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGAtt                                                                                <  2:40290/90‑1 (MQ=255)

       tGGTTTTAATGGTACTGTTTGTTCCGAGATCGACAACAGAGTTTTTCTGTACGTTTCTCCCCATGGCGCTGTAGCCCTGAGCATCGATTg                                                                               <  2:3040357/90‑1 (MQ=255)

       tGGTTTTAATGGTACTGTTTGTTCCGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTg                                                                               >  1:2264136/1‑90 (MQ=255)

       tGGTTTTAATGGTACTGTTTGTTCCGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTg                                                                               <  2:411244/90‑1 (MQ=255)

       tGGTTTTAATGGTACTGTTTGTTCCGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTg                                                                               >  1:2098590/1‑90 (MQ=255)

            ttAATGGTACTGTTTGTTCCGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAgg                                                                          >  2:1949254/1‑90 (MQ=255)

            ttAATGGTACTGTTTGTTCCGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAgg                                                                          <  2:2256395/90‑1 (MQ=255)

             tAATGGTACTGTTTGTTCCGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGt                                                                         >  1:2054968/1‑90 (MQ=255)

             tAATGGTACTGTTTGTTCCGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGt                                                                         >  1:1531295/1‑90 (MQ=255)

              aaTGGTACTGTTTGTTCCGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTc                                                                        <  2:1621564/90‑1 (MQ=255)

              aaTGGTACTGTTTGTTCCGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTc                                                                        <  2:1190004/90‑1 (MQ=255)

              aaTGGTACTGTTTGTTCCGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTc                                                                        <  2:3187521/90‑1 (MQ=255)

               aTGGTACTGTTTGTTCCGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTCAGCATCGATTGTCAGGTCt                                                                       <  2:2792978/90‑1 (MQ=255)

                tGGTACTGTTTGTTCCGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTg                                                                      <  1:670078/90‑1 (MQ=255)

                 ggTACTGTTTGTTCCGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGt                                                                     >  2:1767261/1‑90 (MQ=255)

                    aCTGTTTGTTCCGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGc                                                                  <  2:1308573/90‑1 (MQ=255)

                     cTGTTTGTTCCGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGcc                                                                 >  2:2881790/1‑90 (MQ=255)

                       gtttgttCCGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGt                                                               >  2:3316729/1‑90 (MQ=255)

                        tttgttCCGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTa                                                              >  2:2669599/1‑90 (MQ=255)

                        tttgttCCGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTa                                                              <  2:1777648/90‑1 (MQ=255)

                         ttgttCCGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTaa                                                             <  1:1721707/90‑1 (MQ=255)

                         ttgttCCGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTaa                                                             <  1:1892140/90‑1 (MQ=255)

                          tgttCCGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGGCACGTCTGTAGCCGTaaa                                                            <  2:2312973/90‑1 (MQ=255)

                           gttCCGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTaaaa                                                           >  1:770134/1‑90 (MQ=255)

                           gttCCGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTaaaa                                                           >  2:2754268/1‑90 (MQ=255)

                           gttCCGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTaaaa                                                           >  1:548578/1‑90 (MQ=255)

                           gttCCGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTaaaa                                                           >  1:272846/1‑90 (MQ=255)

                            ttCCGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAAc                                                          >  1:2539832/1‑90 (MQ=255)

                            ttCCGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAAc                                                          <  1:557318/90‑1 (MQ=255)

                            ttCCGAGATCGACAACAGAGTTTTTCTGTACGTTTAGCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAAc                                                          <  1:2841594/90‑1 (MQ=255)

                             tCCGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAAcg                                                         <  2:2940316/90‑1 (MQ=255)

                              ccGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAAcgc                                                        >  2:2026762/1‑90 (MQ=255)

                              ccGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAAcgc                                                        >  1:3274939/1‑90 (MQ=255)

                               cGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAAcgcg                                                       >  2:376928/1‑90 (MQ=255)

                                gagaTCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACgcgc                                                      >  2:3064603/1‑90 (MQ=255)

                                gagaTCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACgcgc                                                      >  1:2674289/1‑90 (MQ=255)

                                 agaTCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCgca                                                     >  2:2021841/1‑90 (MQ=255)

                                 agaTCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCgca                                                     <  1:2247295/90‑1 (MQ=255)

                                  gaTCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCTTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCgcag                                                    <  2:1205189/90‑1 (MQ=255)

                                  gaTCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCgcag                                                    >  2:3454063/1‑90 (MQ=255)

                                    tCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCgcagca                                                  >  1:1627349/1‑90 (MQ=255)

                                    tCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCgcagca                                                  >  1:3228004/1‑90 (MQ=255)

                                       acaacaGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCGCAGCACCa                                               <  1:2176406/90‑1 (MQ=255)

                                        caacaGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCGCAGCACCAt                                              >  1:410581/1‑90 (MQ=255)

                                          acaGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCGCAGCACCATTg                                            <  2:1581897/90‑1 (MQ=255)

                                           caGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCGCAGCACCATTgg                                           >  1:1398480/1‑90 (MQ=255)

                                            agagTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCGCAGCACCATTGGc                                          <  1:750771/90‑1 (MQ=255)

                                             gagTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCGCAGCACCATTGGCg                                         >  2:1384892/1‑90 (MQ=255)

                                                tttttCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCGCAGCACCATTGGCGTTa                                      >  2:3301032/1‑90 (MQ=255)

                                                 ttttCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCGCAGCACCATTGGCGTTAt                                     >  1:554807/1‑90 (MQ=255)

                                                  tttCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCGCAGCACCATTGGCGTTAtt                                    <  1:1279032/90‑1 (MQ=255)

                                                  tttCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCACGTCTGTAGCCGTAAAACGCGCAGCACCATTGGCGTTAtt                                    <  2:3432435/90‑1 (MQ=255)

                                                    tCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCGCAGCACCATTGGCGTTATTGc                                  >  2:1400579/1‑90 (MQ=255)

                                                         aCGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCGCAGCACCATTGGCGTTATTGCCGTTg                             >  2:894188/1‑90 (MQ=255)

                                                         aCGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCGCAGCACCATTGGCGTTATTGCCGTTg                             <  2:116386/90‑1 (MQ=255)

                                                         aCGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCGCAGCACCATTGGCGTTATTGCCGTTg                             <  1:2963583/90‑1 (MQ=255)

                                                         aCGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCGCAGCACCATTGGCGTTATTGCCGTTg                             >  1:1765832/1‑90 (MQ=255)

                                                          cGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCGCAGCACCATTGGCGTTATTGCCGTTga                            <  2:2875250/90‑1 (MQ=255)

                                                          cGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCGCAGCACCATTGGCGTTATTGCCGTTga                            <  2:1515693/90‑1 (MQ=255)

                                                          cGTTTATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCGCAGCACCATTGGCGTTATTGCCGTTga                            >  1:1034771/1‑90 (MQ=255)

                                                            tttATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCGCAGCACCATTGGCGTTATTGCCGTTgaga                          >  1:695029/1‑90 (MQ=255)

                                                             ttATCCCCATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCGCAGCACCATTGGCGTTATTGCCGTTGAGac                         >  1:3073346/1‑90 (MQ=255)

                                                                 ccccATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCGCAGCACCATTGGCGTTATTGCCGTTGAGaccacc                     <  1:1773131/90‑1 (MQ=255)

                                                                 ccccATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCGCAGCACCATTGGCGTTATTGCCGTTGAGaccacc                     >  2:2749798/1‑90 (MQ=255)

                                                                  cccATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCGCAGCACCATTGGCGTTATTGCCGTTGAGACCACCg                    <  1:437689/90‑1 (MQ=255)

                                                                  cccATGGCGCTGTAGCCCAGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCGCAGCACCATTGGCGTTATTGCCGTTGAGACCACCg                    <  1:3116512/90‑1 (MQ=255)

                                                                   ccATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCGCAGCACCATTGGCGTTATTGCCGTTGAGACCACCGa                   >  1:3083561/1‑90 (MQ=255)

                                                                    cATGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCGCAGCACCATTGGCGTTATTGCCGTTGAGACCACCGat                  <  1:3258965/90‑1 (MQ=255)

                                                                     aTGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCGCAGCACCATTGGCGTTATTGCCGTTGAGACCACCGata                 >  1:5018/1‑90 (MQ=255)

                                                                     aTGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCGCAGCACCATTGGCGTTATTGCCGTTGAGACCACCGata                 >  1:161018/1‑90 (MQ=255)

                                                                      tGGCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTATCCGTAAAACGCGCAGCACCATTGGCGTTATTGCCGTTGAGACCACCGatat                <  2:120435/90‑1 (MQ=255)

                                                                       ggCGCTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCGCAGCACCATTGGCGTTATTGCCGTTGAGACCACCGAtata               >  2:2316333/1‑90 (MQ=255)

                                                                        gcgcTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCGCAGCACCATTGGCGTTATTGCCGTTGAGACCACCGATATaa              <  2:979681/90‑1 (MQ=255)

                                                                           cTGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACTCGCAGCACCATTGGCGTTATTGCCGTTGAGACCACCGATATAAaca           >  1:478901/1‑90 (MQ=255)

                                                                            tGTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCGCAGCACCATTGGCGTTATTGCCGTTGAGACCACCGATATAAacac          >  2:1960619/1‑90 (MQ=255)

                                                                             gTAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCGCAGCACCATTGGCGTTATTGCCGTTGAGACCACCGATATAAACAcc         <  1:3106886/90‑1 (MQ=255)

                                                                              tAGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCGCAGCACCATTGGCGTTATTGCCGTTGAGACCACCGATATAAACACCt        >  2:2609244/1‑90 (MQ=255)

                                                                               aGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCGCAGCACCATTGGCGTTATTGCCGTTGAGACCACCGATATAAACACCTg       >  2:1036603/1‑90 (MQ=255)

                                                                               aGCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCGCAGCACCATTGGCGTTATTGCCGTTGAGACCACCGATATAAACACCTg       <  2:2572211/90‑1 (MQ=255)

                                                                                gCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCGCAGCACCATTGGCGTTATTGCCGTTGAGACCACCGATATAAACACCTGt      <  1:2882475/90‑1 (MQ=255)

                                                                                gCCCTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCGCAGCACCATTGGCGTTATTGCCGTTGAGACCACCGATATAAACACCTGt      >  1:1238901/1‑90 (MQ=255)

                                                                                 cccTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCGCAGCACCATTGGCGTTATTGCCGTTGAGACCACCGATATAAACACCTGTa     >  2:351170/1‑90 (MQ=255)

                                                                                 cccTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCGCAGCACCATTGGCGTTATTGCCGTTGAGACCACCGATATAAACACCTGTa     >  1:141126/1‑90 (MQ=255)

                                                                                  ccTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCGCAGCACCATTGGCGTTCTTGCCGTTGAGACCACCGATATAAACACCTGTAc    <  2:2740913/90‑1 (MQ=255)

                                                                                  ccTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCGCAGCACCATTGGCGTTATTGCCGTTGAGACCACCGATATAAACACCTGTAc    >  2:606127/1‑90 (MQ=255)

                                                                                  ccTGAGCATCGATTGTCAGGTCTGTAGCCGTAAAACGCGCAGCACCATTCGCGTTATTGCCGTTGAGACCACCGATATAAACACCTGTAc    <  2:768301/90‑1 (MQ=255)

TCGCCATTGGTTTTAATGGTACTGTTTGTTCCGAGATCGACAACAGAGTTTTTCTGTACGTTTATCCCCATGGCGCTGTAGCCCTGAACATCGATTGTCAGGTCTGTAGCCGTAAAACGCGCAGCACCATTGGCGTTATTGCCGTTGAGACCACCGATATAAACACCTGTACTT  >  AC_000091/1256742‑1256915

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`