Predicted mutation
evidence seq id position mutation annotation gene description
RA AC_000091 2,891,667 T→C C119R (TGC→CGC)  ygcN → predicted oxidoreductase, FAD/NAD(P)‑binding domain

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*AC_0000912,891,6670TC99.2% 482.2 / NA 127C119R (TGC→CGC) ygcNpredicted oxidoreductase, FAD/NAD(P)‑binding domain
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base C (50/76);  total (50/77)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 129 total aligned reads displayed.

TACAGCCCGGCGGTGAATCCTGGAGTGTATTACGTGCACGATTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAATGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGTTATTTGTGGTGACGATATTCTCCGCGCC  >  AC_000091/2891581‑2891753
                                                                                      |                                                                                      
tACAGCCCGGCGGTGAATCCTGGAGTGTATTACGTGCACGATTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCa                                                                                     >  1:3462614/1‑90 (MQ=255)
tACAGCCCGGCGGTGAATCCTGGAGTGTATTACGTGCACGATTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCa                                                                                     >  2:767083/1‑90 (MQ=255)
 aCAGCCCGGCGGTGAATCCTGGAGTGTATTACGTGCACGATTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCAt                                                                                    <  1:1367372/90‑1 (MQ=255)
 aCAGCCCGGCGGTGAATCCTGGAGTGTATTACGTGCACGATTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCAt                                                                                    <  1:1544398/90‑1 (MQ=255)
  cAGCCCGGCGGTGAATCCTGGAGTGTATTACGTGCACGATTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATc                                                                                   >  1:1170883/1‑90 (MQ=255)
    gCCCGGCGGTGCATCCTGGAGTGTATTACGTGCACGATTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATccc                                                                                 <  2:2599520/90‑1 (MQ=255)
    gCCCGGCGGTGAATCCTGGAGTGTATTACGTGCACGATTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATccc                                                                                 <  1:2645092/90‑1 (MQ=255)
    gCCCGGCGGTGAATCCTGGAGTGTATTACGTGCACGATTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATccc                                                                                 <  1:2587948/90‑1 (MQ=255)
     ccaggcggTGAATCATGGAGTGTATTACGTGCACGATTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATcccc                                                                                <  2:1763351/87‑1 (MQ=255)
       cggcggTGAATCCTGGAGTGTATTACGTGCACGATTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCgg                                                                              >  2:2790938/1‑90 (MQ=255)
        ggcggTGAATCCTGGAGTGTATTACGTGCACGATTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGa                                                                             >  2:923972/1‑90 (MQ=255)
        ggcggTGAATCCTGGAGTGTAGTACGTGCACGATTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGa                                                                             >  2:221141/1‑90 (MQ=255)
          cggTGAATCCTGGAGTGTATTACGTGCACGATTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGc                                                                           <  2:1658512/90‑1 (MQ=255)
          cggTGAATCCTGGAGTGTATTACGTGCACGATTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGc                                                                           <  2:1292362/90‑1 (MQ=255)
           ggTGAATCCTGGAGTGTATTACGTGCACGATTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCg                                                                          <  1:2648091/90‑1 (MQ=255)
            gTGAATCCTGGAGTGTATTACGTGCACGATTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGa                                                                         >  1:1828830/1‑90 (MQ=255)
            gTGAATCCTGGAGTGTATTACGTGCACGATTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGa                                                                         <  2:404354/90‑1 (MQ=255)
             tGAATCCTGGAGTGTATTACGTGCACGATTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGAc                                                                        <  1:372888/90‑1 (MQ=255)
              gAATCCTGGAGTGTATTACGTGCACGATTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGACg                                                                       >  2:1771833/1‑90 (MQ=255)
                aTCCTGGAGTGTATTACGTGCAGGATTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGt                                                                     >  2:2483416/1‑90 (MQ=255)
                aTCCTGGAGTGTATTACGTGCACGATTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGt                                                                     <  2:709446/90‑1 (MQ=255)
                aTCCTGGAGTGTATTACGTGCACGATTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGt                                                                     >  1:1797670/1‑90 (MQ=255)
                 tCCTGGAGTGTATTACGTGCACGATTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTg                                                                    >  1:2972478/1‑90 (MQ=255)
                    tGGAGTGTATTACGTGCACGATTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGAt                                                                 >  2:2146789/1‑90 (MQ=255)
                        gtctATTACGTGCACGATTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCAc                                                             <  1:2146786/87‑1 (MQ=255)
                         tgtATTGCCTGCCCGATTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACt                                                            <  2:1317128/90‑1 (MQ=255)
                         tgtATTACGTGCACGATTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACt                                                            >  1:383713/1‑90 (MQ=255)
                          gtATTACGTGCACGATTCTATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTg                                                           <  2:2424705/90‑1 (MQ=255)
                             ttACGTGCACGATTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTAt                                                        <  2:788230/90‑1 (MQ=255)
                              taagTGCACGATTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATg                                                       <  2:38782/87‑1 (MQ=255)
                              tACGTGCACGATTCGATCCGTGGCTGGTTGCCGAAGCCGACAAAGAAGGGGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGGATg                                                       >  2:126329/1‑90 (MQ=255)
                              tACGTGCACGATTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATg                                                       <  2:332262/90‑1 (MQ=255)
                              tACGTGCACGATTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATg                                                       >  2:728980/1‑90 (MQ=255)
                               aCGTGCACGATTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATga                                                      <  2:146996/90‑1 (MQ=255)
                                cGTGCACGATTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATgaa                                                     <  1:2424850/90‑1 (MQ=255)
                                 gTGCACGATTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATgaag                                                    >  1:2887979/1‑90 (MQ=255)
                                  tGCACGATTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATgaaga                                                   <  1:890460/90‑1 (MQ=255)
                                   gCACGATTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATgaagaa                                                  <  2:3301844/90‑1 (MQ=255)
                                    cACGATTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGaaa                                                 <  1:1101983/90‑1 (MQ=255)
                                    cACGATTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGaaa                                                 <  2:1150411/90‑1 (MQ=255)
                                    cACGATTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGGGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGaaa                                                 >  2:563837/1‑90 (MQ=255)
                                    cACGATGCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGaaa                                                 <  1:1575589/90‑1 (MQ=255)
                                       gATTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACg                                              <  2:3012161/90‑1 (MQ=255)
                                        aTTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACgg                                             >  2:706783/1‑90 (MQ=255)
                                         ttCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGc                                            <  2:815752/90‑1 (MQ=255)
                                         ttCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGc                                            <  2:783212/90‑1 (MQ=255)
                                         ttCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGc                                            <  1:668125/90‑1 (MQ=255)
                                          tCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCa                                           >  1:3027739/1‑90 (MQ=255)
                                           cGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCag                                          <  2:1791116/90‑1 (MQ=255)
                                            gATCCGTGGCTGGTTGCATAAGCCGAAAAAGAAGGTGTCTAATGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCaga                                         <  2:2291185/90‑1 (MQ=255)
                                             aTCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCagag                                        >  1:3167143/1‑90 (MQ=255)
                                              tCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGt                                       >  1:2371967/1‑90 (MQ=255)
                                               ccGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTc                                      <  2:2106829/90‑1 (MQ=255)
                                                cGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCt                                     >  1:2333680/1‑90 (MQ=255)
                                                 gTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCtg                                    <  2:282671/90‑1 (MQ=255)
                                                   ggCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCtgtg                                  <  2:1109649/90‑1 (MQ=255)
                                                   ggCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCtgtg                                  <  1:3097793/90‑1 (MQ=255)
                                                     cTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGc                                <  2:2040086/90‑1 (MQ=255)
                                                      tGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCg                               >  1:1544677/1‑90 (MQ=255)
                                                        gTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGtt                             >  1:1068068/1‑90 (MQ=255)
                                                        gTTGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGtt                             <  1:875238/90‑1 (MQ=255)
                                                         ttGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGTTa                            >  1:3069604/1‑90 (MQ=255)
                                                         ttGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGTTa                            <  1:2410445/90‑1 (MQ=255)
                                                          tGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGTTAt                           >  1:1053326/1‑90 (MQ=255)
                                                          tGCCGAAGCCGAAAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGTTAt                           <  1:1483954/90‑1 (MQ=255)
                                                            ccgaagccgaaAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGTTAttt                         <  2:1355647/90‑1 (MQ=255)
                                                             cgaagccgaaAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGTTATTtg                        <  2:3145348/90‑1 (MQ=255)
                                                              gaagccgaaAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGTTATTtgt                       >  2:100679/1‑90 (MQ=255)
                                                              gaagccgaaAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGTTATTtgt                       <  1:2089822/90‑1 (MQ=255)
                                                               aagccgaaAAAGAAGGTGTCGAACGCATCCCCGGAGCGAGGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGTTATTtgtg                      <  1:1177574/90‑1 (MQ=255)
                                                               aagccgaaAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGTTATTtgtg                      <  1:3390625/90‑1 (MQ=255)
                                                               aagccgaaAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGTTATTtgtg                      >  1:2833603/1‑90 (MQ=255)
                                                               aagccgaaAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGTTATTtgtg                      >  2:2969936/1‑90 (MQ=255)
                                                               aagccgaaAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGTTATTtgtg                      <  1:3204206/90‑1 (MQ=255)
                                                                agccgaaAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGTTATTTgtgg                     <  1:326462/90‑1 (MQ=255)
                                                                agccgaaAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGTTATTTgtgg                     <  1:3174198/90‑1 (MQ=255)
                                                                  ccgaaAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGTTATTTgtggtg                   <  1:733874/90‑1 (MQ=255)
                                                                   cgaaAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGTTATTTGTGGTGa                  <  2:278449/90‑1 (MQ=255)
                                                                   cgaaAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGTTATTTGTGGTGa                  <  2:2490574/90‑1 (MQ=255)
                                                                   cgaaAAAGAAGCTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGTTATTTGTGGTGa                  >  1:3373991/1‑90 (MQ=255)
                                                                    gaaAAAGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGTTATTTGTGGTGAc                 >  1:1733037/1‑90 (MQ=255)
                                                                     aaaaaGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGTTATTTGTGGTGACg                <  2:2494181/90‑1 (MQ=255)
                                                                     aaaaaGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGTTATTTGTGGTGACg                >  1:1785523/1‑90 (MQ=255)
                                                                     aaaaaGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGTTATTTGTGGCGACg                <  2:1595164/90‑1 (MQ=255)
                                                                       aaaGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGTTATTTGTGGTGACGat              >  2:2693946/1‑90 (MQ=255)
                                                                       aaaGAAGGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGTTATTTGTGGTGACGat              >  2:2371468/1‑90 (MQ=255)
                                                                        aagaagGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGTTATTTGTGGTGACGata             <  2:2090803/90‑1 (MQ=255)
                                                                        aagaagGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGTTATTTGTGGTGACGata             <  1:146190/90‑1 (MQ=255)
                                                                        aagaagGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGTTATTTGTGGTGACGata             >  1:1899108/1‑90 (MQ=255)
                                                                         agaagGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGTTATTTGTGGTGACGatat            >  2:1326041/1‑90 (MQ=255)
                                                                          gaagGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGTTATTTGTGGTGACGATAtt           <  2:3348656/90‑1 (MQ=255)
                                                                          gaagGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGTTATTTGTGGTGACGATAtt           <  1:1583962/90‑1 (MQ=255)
                                                                           aagGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGTTATTTGTGGTGACGATATtc          >  2:2235458/1‑90 (MQ=255)
                                                                            agGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGTTATTTGTGGTGACGATATtct         >  2:3464761/1‑90 (MQ=255)
                                                                            agGTGTCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGTTATTTGTGGTGACGATATtct         <  1:2904570/90‑1 (MQ=255)
                                                                              gtgtCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGTTATTTGTGGTGACGATATTCTcc       <  1:1367993/90‑1 (MQ=255)
                                                                              gtgtCGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGTTATTTGTGGTGACGATATTCTcc       <  2:818228/90‑1 (MQ=255)
                                                                                  cGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGTTATTTGTGGTGACGATATTCTCCgcgc   <  1:2035633/90‑1 (MQ=255)
                                                                                  cGAACGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGTTATTTGTGGTGACGATATTCTCCgcgc   >  1:3357269/1‑90 (MQ=255)
                                                                                  cGAACGCATCCCCGGAGCGACGGAGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGTTATTTGTGGTGACGATATTCTCCgcgc   >  2:2954033/1‑90 (MQ=255)
                                                                                      |                                                                                      
TACAGCCCGGCGGTGAATCCTGGAGTGTATTACGTGCACGATTCGATCCGTGGCTGGTTGCCGAAGCCGAAAAAGAAGGTGTCGAATGCATCCCCGGAGCGACGGTGGATGCACTGTATGAAGAAAACGGCAGAGTCTGTGGCGTTATTTGTGGTGACGATATTCTCCGCGCC  >  AC_000091/2891581‑2891753

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: