BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	AC_000091	3,153,326	G→A	I183I (ATC→ATT)	yqhC ←	predicted DNA‑binding transcriptional regulator

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	AC_000091	3,153,326	0	G	A	100.0%	522.9 / NA	130	I183I (ATC→ATT)	yqhC	predicted DNA‑binding transcriptional regulator
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (73/57); total (73/57)

Only 100 of 136 total aligned reads displayed.

AATCAGACTGAAGTGAGTCTGGCGACTGACCAGCGCCAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGGATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACGTCGAGTAACCGCTCCGCCGCGCATAAAATCTCTTCTGA  >  AC_000091/3153239‑3153412

aaTCAGACTGAAGTGAGTCTGGCGACTGACCAGCGCCAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGaat                                                                                      >  2:3143930/1‑90 (MQ=255)

aaTCAGACTGAAGTGAGTCTGGCGACTGACCAGCGCCAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGaat                                                                                      <  2:1352788/90‑1 (MQ=255)

 aTCAGACTGAAGTGAGTCTGGCGACTGACCAGCGCCAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGaatg                                                                                     >  1:1211587/1‑90 (MQ=255)

  tCAGACTGAAGTGAGTCTGGCGACTGACCAGCGCCAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGaatga                                                                                    >  2:332236/1‑90 (MQ=255)

    aGACTGAAGTGAGTCTGGCGACTGACCAGCGCCAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATc                                                                                  >  2:1991037/1‑90 (MQ=255)

    aGACTGAAGTGAGTCTGGCGACTGACCAGCGCCAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATc                                                                                  >  2:3388003/1‑90 (MQ=255)

     gACTGAAGTGAGTCTGGCGACTGACCAGCGCCAGTAACGGGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCt                                                                                 <  1:81921/90‑1 (MQ=255)

     gACTGAAGTGAGTCTGGCGACTGACCAGCGCCAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCt                                                                                 <  2:654965/90‑1 (MQ=255)

     gACTGAAGTGAGTCTGGCGACTGACCAGCGCCAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCt                                                                                 >  1:329286/1‑90 (MQ=255)

      aCTGAAGTGAGTCTGGCGACTGACCAGCGCCAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTg                                                                                <  1:945961/90‑1 (MQ=255)

      aCTGAAGTGAGTCTGGCGACTGACCAGCGCCAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTg                                                                                <  1:464494/90‑1 (MQ=255)

        tGAAGTGAGTCTGGCGACTGACCAGCGCCAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGtt                                                                              >  2:1018531/1‑90 (MQ=255)

        tGAAGTGAGTCTGGCGACTGACCAGCGCCAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGtt                                                                              >  2:3290067/1‑90 (MQ=255)

         gAAGTGAGTCTGGCGACTGACCAGCGCCAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGttt                                                                             <  2:1145303/90‑1 (MQ=255)

         gAAGTGAGTCTGGCGACTGACCAGCGCCAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGttt                                                                             >  2:3106973/1‑90 (MQ=255)

         gAAGTGAGTCTGGCGACTGACCAGCGCCAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGttt                                                                             >  1:1173313/1‑90 (MQ=255)

           aGTGAGTCTGGCGACTGACCAGCGCCAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGc                                                                           <  1:594946/90‑1 (MQ=255)

           aGTGAGTCTGGCGACTGACCAGCGCCAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGc                                                                           <  1:40972/90‑1 (MQ=255)

             tGAGTCTGGCGACTGACCAGCGCCAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCg                                                                         <  1:467453/90‑1 (MQ=255)

             tGAGTCTGGCGACTGACCAGCGCCAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCg                                                                         >  1:3327290/1‑90 (MQ=255)

              gAGTCTGGCGACTGACCAGCGCCAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCga                                                                        >  1:1732491/1‑90 (MQ=255)

                gTCTGGCGACTGACCAGCGCCAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCgaga                                                                      >  2:1849055/1‑90 (MQ=255)

                 tCTGGCGACTGACCAGCGCCAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGaa                                                                     <  2:496738/90‑1 (MQ=255)

                 tCTGGCGACTGACCAGCGCCAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGaa                                                                     >  2:2395991/1‑90 (MQ=255)

                 tCTGGCGACTGACCAGCGCCAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGaa                                                                     >  2:1526338/1‑90 (MQ=255)

                  cTGGCGACTGACCAGCGCCAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAAt                                                                    <  1:1369571/90‑1 (MQ=255)

                     gCGACTGACCAGCGCCAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATAcg                                                                 >  2:2511747/1‑90 (MQ=255)

                      cGACTGACCAGCGCCAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTCCAGAATTTCGCGAATGATCTGTTTGCCGAGAATAcgc                                                                <  2:464061/90‑1 (MQ=255)

                      cGACTGACCAGCGCCAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATAcgc                                                                >  2:3139078/1‑90 (MQ=255)

                      cGACTGACCAGCGCCAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATAcgc                                                                >  1:2475827/1‑90 (MQ=255)

                       gACTGACCAGCGCCAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATAcgcg                                                               >  2:3294810/1‑90 (MQ=255)

                        aCTGACCAGCGCCAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACgcgc                                                              >  2:107816/1‑90 (MQ=255)

                         cTGACCAGCGCCAGTAACGCGCCGGCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCa                                                             >  1:2231877/1‑90 (MQ=255)

                         cTGACCAGCGCCAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCa                                                             <  2:842524/90‑1 (MQ=255)

                         cTGACCAGCGCCAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCa                                                             >  2:2776595/1‑90 (MQ=255)

                          tGACCAGCGCCAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCAt                                                            >  1:2928644/1‑90 (MQ=255)

                           gACCAGCGCCAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATc                                                           <  1:3152027/90‑1 (MQ=255)

                           gACCAGCGCCAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATc                                                           >  1:2234599/1‑90 (MQ=255)

                            aCCAGCGCCAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATcc                                                          >  1:1165033/1‑90 (MQ=255)

                               aGCGCCAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGt                                                       <  1:2727213/90‑1 (MQ=255)

                                 cgcCAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTgg                                                     <  1:1558217/90‑1 (MQ=255)

                                 cgcCAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTgg                                                     <  2:2240094/90‑1 (MQ=255)

                                 cgcCAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTgg                                                     >  1:2557340/1‑90 (MQ=255)

                                   ccAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTc                                                   <  1:532123/90‑1 (MQ=255)

                                    cAGTAAGGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCg                                                  >  2:1830314/1‑90 (MQ=255)

                                    cAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGCATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCg                                                  >  2:2355771/1‑90 (MQ=255)

                                      gTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCt                                                <  1:2857961/90‑1 (MQ=255)

                                       tAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTc                                               <  1:2081617/90‑1 (MQ=255)

                                       tAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTc                                               <  1:1642824/90‑1 (MQ=255)

                                         aCGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCa                                             <  1:2278323/90‑1 (MQ=255)

                                           gcgcCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATc                                           <  2:2590011/90‑1 (MQ=255)

                                            cgccgccgcAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCa                                          >  1:2457527/1‑90 (MQ=255)

                                            cgccgccgcAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCa                                          <  1:442669/90‑1 (MQ=255)

                                            cgccgccgcAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCa                                          <  1:1642703/90‑1 (MQ=255)

                                              ccgccgcAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTNNTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACg                                        >  2:2384785/1‑90 (MQ=255)

                                              ccgccgcAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACg                                        >  2:3388309/1‑90 (MQ=255)

                                              ccgccgcAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACg                                        <  2:3339395/90‑1 (MQ=255)

                                              ccgccgcAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACg                                        <  1:399016/90‑1 (MQ=255)

                                                gccgcAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACGTc                                      <  1:1600759/90‑1 (MQ=255)

                                                gccgcAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACGTc                                      >  1:2047325/1‑90 (MQ=255)

                                                    cAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACGTCGAGt                                  >  2:2659809/1‑90 (MQ=255)

                                                     aaGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACGTCGAGTa                                 >  1:1130159/1‑90 (MQ=255)

                                                      aGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACGTCGAGTaa                                >  1:2325804/1‑90 (MQ=255)

                                                      aGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACGTCGAGTaa                                <  2:2335277/90‑1 (MQ=255)

                                                      aGGTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACGTCGAGTaa                                <  2:579597/90‑1 (MQ=255)

                                                       ggTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACGTCGAGTAAc                               >  1:2107003/1‑90 (MQ=255)

                                                       ggTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACGTCGAGTAAc                               >  1:3065977/1‑90 (MQ=255)

                                                        gTCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACGTCGAGTAAcc                              <  2:2521480/90‑1 (MQ=255)

                                                         tCCGGTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACGTCGAGTAACCg                             >  1:1216308/1‑90 (MQ=255)

                                                            ggTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACGTCGAGTAACCGCTc                          >  2:2203675/1‑90 (MQ=255)

                                                             gTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACGTCGAGTAACCGCTcc                         <  1:2872763/90‑1 (MQ=255)

                                                             gTCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACGTCGAGTAACCGCTcc                         <  2:1338851/90‑1 (MQ=255)

                                                              tCAGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACGTCGAGTAACCGCTccg                        >  2:2099977/1‑90 (MQ=255)

                                                                aGCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACGTCGAGTAACCGCTccgcc                      <  1:154251/90‑1 (MQ=255)

                                                                 gCACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACGTCGAGTAACCGCTccgccg                     <  2:2255482/90‑1 (MQ=255)

                                                                  cACGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACGTCGAGTAACCGCTCcgccgc                    >  2:1925125/1‑90 (MQ=255)

                                                                   aCGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACGTCGAGTAACCGCTCCGCcgcg                   >  1:2375864/1‑90 (MQ=255)

                                                                    cGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACGTCGAGTAACCGCTCCGCCgcgc                  >  1:1133841/1‑90 (MQ=255)

                                                                    cGTAGTACAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACGTCGAGTAACCGCTCCGCCgcgc                  >  2:3449424/1‑90 (MQ=255)

                                                                     gtagtaCAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACGTCGATTAACCGCACCGCCGCGCa                 <  2:2767478/90‑1 (MQ=255)

                                                                      tagtaCAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACGTCGAGTAACCGCTCCGCCGCGCAt                <  1:557179/90‑1 (MQ=255)

                                                                       agtaCAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACGTCGAGTAACCGCTCCGCCGCGCATa               >  2:1237656/1‑90 (MQ=255)

                                                                       agtaCAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACGTAGAGTAACCGCTCCGCCGCGCATa               >  2:2610785/1‑90 (MQ=255)

                                                                       agtaCAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGNNGTCGCTCCATCACGTCGAGTAACCGCTCCGCCGCGCATa               >  2:77670/1‑90 (MQ=255)

                                                                        gtaCAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACGTCGAGTAACCGCTCCGCCGCGCATaa              >  2:1618803/1‑90 (MQ=255)

                                                                        gtaCAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACGTCGAGTAACCGCTCCGCCGCGCATaa              >  1:1809753/1‑90 (MQ=255)

                                                                         taCAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACGTCGAGTAACCGCTCCGCCGCGCATaaa             <  1:2177469/90‑1 (MQ=255)

                                                                          aCAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACGTCGAGTAACCGCTCCGCCGCGCATaaaa            >  1:2994185/1‑90 (MQ=255)

                                                                          aCAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACGTCGAGTAACCGCTCCGCCGCGCATaaaa            >  2:1521083/1‑90 (MQ=255)

                                                                           cAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACGTCGAGTAACCGCTCCGCCGCGCATAAAAt           >  2:1851175/1‑90 (MQ=255)

                                                                           cAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACGTCGAGTAACCGCTCCGCCGCGCATAAAAt           >  2:2803049/1‑90 (MQ=255)

                                                                           cAGAATTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTACATCACGTCGAGTAACCGCTCCGCCGCGCATAAAAt           <  1:426595/90‑1 (MQ=255)

                                                                              aaTTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACGTCGAGTAACCGCTCCGCCGCGCATAAAAtctc        <  1:3358729/90‑1 (MQ=255)

                                                                               aTTTCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACGTCGAGTAACCGCTCCGCCGCGCATAAAATctct       <  2:3281396/90‑1 (MQ=255)

                                                                                tttCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACGTCGAGTAACCGCTCCGCCGCGCATAAAATCtctt      >  1:3204437/1‑90 (MQ=255)

                                                                                  tCGCGAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACGTCGAGTAACCGCTCCGCCGCGCATAAAATCtcttct    <  2:856690/90‑1 (MQ=255)

                                                                                   cgcgAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACGTCGAGTAACCGCTCCGCCGCGCATAAAATCTCTTCTg   <  1:114539/90‑1 (MQ=255)

                                                                                   cgcgAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACGTCGAGTAACCGCTCCGCCGCGCATAAAATCTCTTCTg   >  2:215907/1‑90 (MQ=255)

                                                                                   cgcgAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACGTCGAGTAACCGCTCCGCCGCGCATAAAATCTCTTCTg   >  1:1129595/1‑90 (MQ=255)

                                                                                    gcgAATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACGTCGAGTAACCGCTCCGCCGCGCATAAAATCTCTTCTGa  <  2:675963/90‑1 (MQ=255)

AATCAGACTGAAGTGAGTCTGGCGACTGACCAGCGCCAGTAACGCGCCGCCGCAAGGTCCGGTCAGCACGTAGTACAGAATTTCGCGGATGATCTGTTTGCCGAGAATACGCGCATCCAGTGGTCGCTCCATCACGTCGAGTAACCGCTCCGCCGCGCATAAAATCTCTTCTGA  >  AC_000091/3153239‑3153412

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`