BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	AC_000091	3,247,179	T→C	S29P (TCC→CCC)	yqjB →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	AC_000091	3,247,179	0	T	C	100.0%	564.0 / NA	145	S29P (TCC→CCC)	yqjB	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (85/60); total (85/60)

Only 100 of 152 total aligned reads displayed.

GATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGTCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAGGCACAACGATGCCAGACGGTTTTTCAATCTGGCAT  >  AC_000091/3247094‑3247265

gATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCcgc                                                                                    >  2:3151772/1‑90 (MQ=255)

 aTGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCcgcg                                                                                   <  1:401186/90‑1 (MQ=255)

  tGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCgg                                                                                  >  1:1287940/1‑90 (MQ=255)

    cAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGtt                                                                                >  1:2458184/1‑90 (MQ=255)

     aaaTACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTc                                                                               <  1:540283/90‑1 (MQ=255)

     aaaTACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTc                                                                               >  1:1605294/1‑90 (MQ=255)

     aaaTACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTc                                                                               >  2:3395300/1‑90 (MQ=255)

      aaTACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCg                                                                              <  2:2059739/90‑1 (MQ=255)

       aTACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGc                                                                             >  2:479483/1‑90 (MQ=255)

         cccTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCa                                                                           <  2:2551813/89‑1 (MQ=255)

         aCCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCa                                                                           >  1:3134710/1‑90 (MQ=255)

          ccTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAg                                                                          <  1:1098227/90‑1 (MQ=255)

           cTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGc                                                                         >  1:2085511/1‑90 (MQ=255)

            tCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCa                                                                        <  2:2384580/90‑1 (MQ=255)

              gCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAag                                                                      >  1:2091250/1‑90 (MQ=255)

              gCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAag                                                                      <  2:1109284/90‑1 (MQ=255)

               cATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAaga                                                                     >  1:1096550/1‑90 (MQ=255)

               cATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAaga                                                                     <  1:810669/90‑1 (MQ=255)

               cATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAaga                                                                     >  1:1559438/1‑90 (MQ=255)

                aTGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAagag                                                                    >  2:1725407/1‑90 (MQ=255)

                   tCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCt                                                                 <  1:1430835/90‑1 (MQ=255)

                   tCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCAGTTCGCCAGCAAGAGTCt                                                                 >  2:2397529/1‑90 (MQ=255)

                    cGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTa                                                                <  1:1667382/90‑1 (MQ=255)

                    cGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTa                                                                <  1:166601/90‑1 (MQ=255)

                     gCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTAc                                                               <  2:1875033/90‑1 (MQ=255)

                     gCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTAc                                                               <  2:1876769/90‑1 (MQ=255)

                       ttCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGc                                                             >  2:2902892/1‑90 (MQ=255)

                        tCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCt                                                            <  1:995740/90‑1 (MQ=255)

                        tCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTCGCTGGCCTGGCCCGCGGTTTGCCAGCAAGAGTCTACGCt                                                            <  2:2810816/90‑1 (MQ=255)

                         cGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTg                                                           >  1:734474/1‑90 (MQ=255)

                          gCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTgg                                                          >  1:965928/1‑90 (MQ=255)

                          gCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTgg                                                          <  2:2425623/90‑1 (MQ=255)

                          gCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGACGGCACGCTGGTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTgg                                                          >  2:1764396/1‑90 (MQ=255)

                           ccAGCTAGCCTGGTCCGGCGCTGTTTTTCTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGc                                                         <  2:975652/90‑1 (MQ=255)

                            cAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCg                                                        >  2:1847850/1‑90 (MQ=255)

                            cAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCg                                                        >  2:2198442/1‑90 (MQ=255)

                             aGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGa                                                       >  2:1528597/1‑90 (MQ=255)

                             aGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGa                                                       >  2:1959791/1‑90 (MQ=255)

                             aGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGa                                                       <  1:2021062/90‑1 (MQ=255)

                              gCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCggt                                                      >  1:2351863/1‑88 (MQ=255)

                               cTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGAtt                                                     >  2:1334666/1‑90 (MQ=255)

                                tAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTc                                                    >  2:2089911/1‑90 (MQ=255)

                                tAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTc                                                    >  2:2189132/1‑90 (MQ=255)

                                tAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTc                                                    <  1:3092042/90‑1 (MQ=255)

                                 aGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCg                                                   >  1:2587536/1‑90 (MQ=255)

                                  gCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGGCTACGCTGGCGATTCGt                                                  >  2:2477725/1‑90 (MQ=255)

                                   ccTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTg                                                 >  2:3373563/1‑90 (MQ=255)

                                    cTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGc                                                <  2:2923032/90‑1 (MQ=255)

                                    cTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGc                                                >  2:3242203/1‑90 (MQ=255)

                                     tGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGcc                                               <  2:334503/90‑1 (MQ=255)

                                      ggTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCg                                              <  2:3136214/90‑1 (MQ=255)

                                      ggTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCg                                              <  1:3071613/90‑1 (MQ=255)

                                      ggTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCg                                              >  2:454496/1‑90 (MQ=255)

                                       gTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGTTGCGTGCCGt                                             >  1:3196694/1‑90 (MQ=255)

                                       gTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGt                                             >  1:286267/1‑90 (MQ=255)

                                        tCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGtt                                            <  1:2493541/90‑1 (MQ=255)

                                        tCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGtt                                            <  2:3057166/90‑1 (MQ=255)

                                          cGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTtca                                          >  1:3426515/1‑90 (MQ=255)

                                          cGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGCGCCGTtca                                          >  2:965106/1‑90 (MQ=255)

                                              gcTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGGTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCaa                                      >  2:1962150/1‑90 (MQ=255)

                                                tGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAgg                                    <  2:1335730/90‑1 (MQ=255)

                                                tGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAgg                                    <  1:2206517/90‑1 (MQ=255)

                                                   tttACTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAGGcac                                 >  1:377174/1‑90 (MQ=255)

                                                      aCTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAGGCACAAc                              >  2:1771950/1‑90 (MQ=255)

                                                       cTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAGGCACAACg                             >  2:174964/1‑90 (MQ=255)

                                                       cTTCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAGGCACAACg                             <  1:3045099/90‑1 (MQ=255)

                                                        ttCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAGGCACAACGa                            <  1:2155908/90‑1 (MQ=255)

                                                        ttCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAGGCACAACGa                            >  1:518563/1‑90 (MQ=255)

                                                        ttCTGGTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAGGCACAACGa                            >  1:894564/1‑90 (MQ=255)

                                                            ggTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAGGCACAACGATGcc                        >  2:729616/1‑90 (MQ=255)

                                                            ggTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAGGCACAACGATGcc                        <  1:2771869/90‑1 (MQ=255)

                                                             gTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAGGCACAACGATGCCa                       >  1:2789933/1‑90 (MQ=255)

                                                             gTCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAGGCACAACGATGCCa                       >  2:1840383/1‑90 (MQ=255)

                                                              tCGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAGGCACAACGATGCCAg                      >  1:2948682/1‑90 (MQ=255)

                                                               cGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAGGCACAACGATGCCAGa                     <  2:1173632/90‑1 (MQ=255)

                                                               cGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAGGCACAACGATGCCAGa                     <  2:3074170/90‑1 (MQ=255)

                                                               cGGCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAGGAACAACGATGCCAGa                     >  2:2881979/1‑90 (MQ=255)

                                                                 gCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAGGCACAACGATGCCAGACg                   <  2:3448565/90‑1 (MQ=255)

                                                                 gCACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAGGCACAACGATGCCAGACg                   <  1:2915903/90‑1 (MQ=255)

                                                                  cACGCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAGGCACAACGATGCCAGACgg                  <  1:1230516/90‑1 (MQ=255)

                                                                     gCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAGGCACAACGATGCCAGACGGttt               >  2:61777/1‑90 (MQ=255)

                                                                     gCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAGGCACAACGATGCCAGACGGttt               <  2:2675539/90‑1 (MQ=255)

                                                                     gCTGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAGGCACAACGATGCCAGACGGttt               <  2:1212693/90‑1 (MQ=255)

                                                                       tGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAGGCACAACGATGCCAGACGGttttt             >  2:3435610/1‑90 (MQ=255)

                                                                       tGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAGGCACAACGATGCCAGACGGttttt             >  2:578009/1‑90 (MQ=255)

                                                                       tGTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAGGCACAACGATGCCAGACGGgtttt             >  2:2168367/1‑90 (MQ=255)

                                                                        gTTGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAGGCACAACGATGCCAGACGGTTTTTc            >  2:2251479/1‑90 (MQ=255)

                                                                         ttGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAGGCACAACGATGCCAGACGGTTTTTCa           >  1:2612968/1‑90 (MQ=255)

                                                                         ttGCTGGCCACGCCCGCGGTTCGCCAGCCAGAGTCTACGCTGGCGATTCGTGCCGTTCCTCAAGGCACAACGATTCCAGCCGGTTTTTCa           <  2:2754695/90‑1 (MQ=255)

                                                                          tGCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAGGCACAACGATGCCAGACGGTTTTTCaa          >  1:2682485/1‑90 (MQ=255)

                                                                           gCTGGCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAGGCACAACGATGCCAGACGGTTTTTCAAt         <  2:719627/90‑1 (MQ=255)

                                                                             tggcctggccCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAGGCACAACGATGCCAGACGGTTTTTCAATCt       >  1:1927599/1‑90 (MQ=255)

                                                                             tggcctggccCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAGGCACAACGATGCCAGACGGTTTTTCAATCt       <  1:422254/90‑1 (MQ=255)

                                                                             tggcctggccCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAGGCACAACGATGCCAGACGGTTTTTCAATCt       <  2:1552325/90‑1 (MQ=255)

                                                                             tggcctggccCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAGGCACAACGATGCCAGACGGTTTTTCAATCt       <  2:872081/90‑1 (MQ=255)

                                                                              ggCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAGGCACAACGATGCCAGACGGTTTTTCAATCTg      >  1:3462650/1‑90 (MQ=255)

                                                                               gCCTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAGGCACAACGATGCCAGACGGTTTTTCAATCTgg     >  1:2277254/1‑90 (MQ=255)

                                                                                ccTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAGGCACAACGATGCCAGACGGTTTTTCAATCTGGc    <  1:2327393/90‑1 (MQ=255)

                                                                                 cTGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAGGCACAACGATGCCAGACGGTTTTTCAATCTGGCa   >  1:1145848/1‑90 (MQ=255)

                                                                                  tGGCCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAGGCACAACGATGCCAGACGGTTTTTCAATCTGGCAt  <  1:2357224/90‑1 (MQ=255)

GATGCAAATACCTCGCATGTCGCTTCGCCAGCTAGCCTGGTCCGGCGCTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGTCCGCGGTTCGCCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAGGCACAACGATGCCAGACGGTTTTTCAATCTGGCAT  >  AC_000091/3247094‑3247265

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`