| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AC_000091 | 1,132,560 | 1 bp→TT | intergenic (‑120/‑35) | flgA ← / → flgB | assembly protein for flagellar basal‑body periplasmic P ring/flagellar component of cell‑proximal portion of basal‑body rod |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AC_000091 | 1,132,559 | 1 | . | T | 96.2% | 411.5 / 9.1 | 105 | intergenic (‑119/‑36) | flgA/flgB | assembly protein for flagellar basal‑body periplasmic P ring/flagellar component of cell‑proximal portion of basal‑body rod |
| Reads supporting (aligned to +/- strand): ref base . (2/2); new base T (64/37); total (66/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.27e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.62e-02 | |||||||||||
| * | AC_000091 | 1,132,560 | 0 | G | T | 100.0% | 428.1 / NA | 105 | intergenic (‑120/‑35) | flgA/flgB | assembly protein for flagellar basal‑body periplasmic P ring/flagellar component of cell‑proximal portion of basal‑body rod |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (66/39); total (66/39) | |||||||||||
Only 100 of 114 total aligned reads displayed.
GCAATGACCATCAACGGCATAAATAGCGACCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATTTAA‑G‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTCGACGCCGCCTTACGTTTTCAACAAGAGGCGCTCAATCTGCG > AC_000091/1132483‑1132650 ||| gCAATGACCATCAACGGCATAAATAGCGACCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGa > 2:2290859/1‑90 (MQ=255)gCAATGACCATCAACGGCATAAATAGCGACCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGa > 2:407344/1‑90 (MQ=255) cAATGACCATCAACGGCATAAATAGCGACCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGaa > 1:1021629/1‑90 (MQ=255) aaTGACCATCAACGGCATAAATAGCGACCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAAt > 1:1517904/1‑90 (MQ=255) aaTGACCATCAACGGCATAAATAGCGACCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAA‑TTCTGATGGCAGAAt < 1:692877/90‑1 (MQ=255) aTGACCATCAACGGCATAAATAGCGACCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAAtt > 1:3140192/1‑90 (MQ=255) tGACCATCAACGGCATAAATAGCGACCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAAttt > 2:2018367/1‑90 (MQ=255) aCCATCAACGGCATAAATAGCGACCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTg > 2:465062/1‑90 (MQ=255) aCCATCAACGGCATAAATAGCGACCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTg > 1:1561301/1‑90 (MQ=255) ccATCAACGGCATAAATAGCGACCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGa > 2:67963/1‑90 (MQ=255) ccATCAACGGCATAAATAGCGACCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGa < 2:1131840/90‑1 (MQ=255) ccATCAACGGCATAAATAGCGACCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGa > 2:1451291/1‑90 (MQ=255) cATCAACGGCATAAATAGCGACCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGAt > 1:1524271/1‑90 (MQ=255) aTCAACGGCATAAATAGCGACCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATa < 1:2548616/90‑1 (MQ=255) tCAACGGCATAAAGAGCGACCCATTTCGCGTTTATTCCGCGGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATAc < 2:1972452/90‑1 (MQ=255) cAACGGCATAAATAGCGACCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATAcc > 1:1227028/1‑90 (MQ=255) cAACGGCATAAATAGCGACCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATAcc > 2:1290224/1‑90 (MQ=255) cAACGGCATAAATAGCGACCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATAcc > 1:2580463/1‑90 (MQ=255) aaCGGCATAAATAGCGACCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCt > 2:1020824/1‑90 (MQ=255) aaCGGCATAAATAGCGACCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCt > 2:2450936/1‑90 (MQ=255) aCGGCATAAATAGCGACCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTg < 1:2828383/90‑1 (MQ=255) cGGCATAAATAGCGACCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGc > 1:17128/1‑90 (MQ=255) ggCATAAATAGCGCCCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCg < 2:660350/90‑1 (MQ=255) ggCATAAATAGCGACCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCg > 2:2762570/1‑90 (MQ=255) cATAAATAGCGCCCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCgga < 2:361219/90‑1 (MQ=255) cATAAATAGCGACCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCgga > 1:1043893/1‑90 (MQ=255) tAAATAGCGACCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCggagg > 2:2920973/1‑90 (MQ=255) tAAATAGCGACCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCggagg < 2:102622/90‑1 (MQ=255) aaaTAGCGACCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCggagga > 2:825936/1‑90 (MQ=255) aaTAGCGACCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGgaggag > 2:869530/1‑90 (MQ=255) aTAGTGACCTATTTTTCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGgaga < 2:1102740/90‑1 (MQ=255) aTAGCGACCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGgaga > 1:2524552/1‑90 (MQ=255) aTAGCGACCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGgaga < 2:3173992/90‑1 (MQ=255) tAGCGACCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGat > 1:3103953/1‑90 (MQ=255) tAGCGACCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGat < 1:33941/90‑1 (MQ=255) gcgcCCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGatat < 2:948152/90‑1 (MQ=255) cGACCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATg > 2:2779141/1‑90 (MQ=255) cGACCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATg < 1:2759405/90‑1 (MQ=255) gACCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGc > 1:1665574/1‑90 (MQ=255) gACCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGc < 2:2919519/90‑1 (MQ=255) gACCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGc < 1:208373/90‑1 (MQ=255) aCCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCt < 1:346161/90‑1 (MQ=255) aCCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCt < 2:1231665/90‑1 (MQ=255) aCCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCt < 1:1913531/90‑1 (MQ=255) ccATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCg > 2:227848/1‑90 (MQ=255) aTTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGTATTTTGATACCTGCGGAGGAGATATGCTCGAt > 2:2394769/1‑90 (MQ=255) aTTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGAt < 2:748750/90‑1 (MQ=255) aTTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGAt > 1:295292/1‑90 (MQ=255) aTTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGAt > 1:1174424/1‑90 (MQ=255) aTTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGAt < 1:3112669/90‑1 (MQ=255) aTTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGAt > 1:218672/1‑90 (MQ=255) tttGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATaa < 1:493745/90‑1 (MQ=255) tttGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATaa < 1:1210431/90‑1 (MQ=255) ttGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAg > 1:2535260/1‑90 (MQ=255) ttGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAg > 1:1509305/1‑90 (MQ=255) tGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGc > 2:2240309/1‑90 (MQ=255) gCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCt < 1:1284210/90‑1 (MQ=255) cGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTc < 2:789422/90‑1 (MQ=255) gTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTCg > 2:3062367/1‑90 (MQ=255) gTTTATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTCg > 2:914294/1‑90 (MQ=255) ttATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTCGAc < 1:501120/90‑1 (MQ=255) tATTCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTCGAcg > 2:2238248/1‑90 (MQ=255) tATTCCGCCGATAACGCGCGCGTAAAGGCATCAAA‑TTCTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTCGAcg < 2:2093064/90‑1 (MQ=255) ttCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTCGAcgcc > 1:2083364/1‑90 (MQ=255) ttCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTCGAcgcc < 2:104551/90‑1 (MQ=255) ttCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTCGAcgcc > 1:1132933/1‑90 (MQ=255) ttCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTCGAcgcc > 2:845820/1‑90 (MQ=255) tCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTCGAcgccg < 1:630569/90‑1 (MQ=255) tCCGCCGATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTCGAcgccg > 1:3214877/1‑90 (MQ=255) cgccgATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTCGACgccgcc < 1:457649/90‑1 (MQ=255) cgccgATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTCGACgccgcc > 2:2338746/1‑90 (MQ=255) ccgATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTCGACGCCGCCtt > 1:2575764/1‑90 (MQ=255) cgATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGANTTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTCGACGCTGCCTTa < 2:1244767/90‑1 (MQ=255) cgATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTCGACGCCGCCTTa > 2:2068522/1‑90 (MQ=255) cgATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTCGACGCCGCCTTa > 1:2898262/1‑90 (MQ=255) cgATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTCGACGCCGCCTTa > 1:3221805/1‑90 (MQ=255) cgATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTCGACGCCGCCTTa > 1:473256/1‑90 (MQ=255) gATAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTCGACGCCGCCTTAc > 1:927349/1‑90 (MQ=255) aTAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTCGACGCCGCCTTACg < 2:2546401/90‑1 (MQ=255) aTAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTCGACGCCGCCTTACg > 1:483558/1‑90 (MQ=255) aTAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTCGACGCCGCCTTACg < 2:2908180/90‑1 (MQ=255) tAACGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTCGACGCCGCCTTACGt > 1:1419782/1‑90 (MQ=255) aaCGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTCGACGCCGCCTTACGtt > 2:1721471/1‑90 (MQ=255) aCGCGCGCGTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTCGACGCCGCCTTACGttt > 2:3316088/1‑90 (MQ=255) cgcgcgcgTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTCGACGCCGCCTTACGtttt > 2:1539748/1‑90 (MQ=255) cgcgcgcgTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTCGACGCCGCCTTACGtttt < 2:3159655/90‑1 (MQ=255) cgcgcgcgTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTCGACGCCGCCTTACGtttt > 1:1119595/1‑90 (MQ=255) cgcgcgTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTCGACGCCGCCTTACGTTTTca > 2:955694/1‑90 (MQ=255) cgcgTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTCGACGCCGCCTTACGTTTTcaac > 1:1769385/1‑90 (MQ=255) cgcgTAAAGGCATCAAA‑TTATGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTCGACGCCGCCTTACGTTTTcaac > 2:943571/1‑90 (MQ=255) cgTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTCGACGCCGCCTTACGTTTTcaacaa > 2:2206572/1‑90 (MQ=255) cgTAAAGGCATCAAATT‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTCGACGCCGCCTTACGTTTTcaacaa > 1:1614250/1‑90 (MQ=255) aattcTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTCGACGCCGCCTTACGTTTTCAACAAGAGGCGCTCAATc < 2:713441/86‑1 (MQ=255) aattcTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTCGACGCCGCCTTACGTTTTCAACAAGAGGCGCTCAATc < 1:2405940/86‑1 (MQ=255) attcTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTCGACGCCGCCTTACGTTTTCAACAAGAGGCGCTCAATCt > 2:537131/4‑90 (MQ=255) attcTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTCGACGCCGCCTTACGTTTTCAACAAGAGGCGCTCAATCt < 1:2003993/87‑1 (MQ=255) cTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTCGACGCCGCCTTACGTTTTCAACAAGAGGCGCTCAATCTgcg > 1:1755751/1‑90 (MQ=255) cTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTCGACGCCGCCTTACGTTTTCAACAAGAGGCGCTCAATCTgcg > 1:571774/1‑90 (MQ=255) cTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTCGACGCCGCCTTACGTTTTCAACAAGAGGCGCTCAATCTgcg < 2:80613/90‑1 (MQ=255) cTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTCGACGCCGCCTTACGTTTTCAACAAGAGGCGCTCAATCTgcg < 1:3251629/90‑1 (MQ=255) ||| GCAATGACCATCAACGGCATAAATAGCGACCCATTTTGCGTTTATTCCGCCGATAACGCGCGCGTAAAGGCATTTAA‑G‑CTGATGGCAGAATTTTGATACCTGCGGAGGAGATATGCTCGATAAGCTCGACGCCGCCTTACGTTTTCAACAAGAGGCGCTCAATCTGCG > AC_000091/1132483‑1132650 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |