Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1242451	1242521	71	4 [1]	[1] 2	treA	alpha,alpha‑trehalase

TATACCTCGCGAAAGCGTCCGCCCGGCACGACATAAGGTTCCGGCAGCGGTAACAGAGAATCCCATTTTTCGGTGTTTTCGGTAGAACGCGTTAATA  >  NZ_CP009273/1242363‑1242459                                                                                        |          tataCATCCCGAAAGCGTCCGCCCGGCAAGACATAAGGTCCCGGAAGCGGTAACAGAGAATGCCATTTTTCGGGGTAGCAGGTAGAActct        >  2:33458/1‑88 (MQ=255)       tCGCGAAAGCGTCCGCCCGGCACGACATAAGGTTCCGGCAGCGGTAACAGAGAATCCCATTTTTCGGTGTTTTCGGTAGAACGCGTTAATa  >  1:176182/1‑91 (MQ=255)                                         ccGGCAGCGGTAACAGAGAATCCCATTTTTCGGTGTTTTCGGTAGAAc           >  1:58476/1‑48 (MQ=255)                                         ccGGCAGCGGTAACAGAGAATCCCATTTTTCGGTGTTTTCGGTAGAAc           <  2:58476/48‑1 (MQ=255)                                                                                        |          TATACCTCGCGAAAGCGTCCGCCCGGCACGACATAAGGTTCCGGCAGCGGTAACAGAGAATCCCATTTTTCGGTGTTTTCGGTAGAACGCGTTAATA  >  NZ_CP009273/1242363‑1242459

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑