| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 3,148,843 | (A)7→8 | coding (130/1164 nt) | yqhD → | alcohol dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 3,148,836 | 1 | . | A | 100.0% | 42.6 / NA | 13 | V41V (GTG→GTA) | yqhD | alcohol dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base A (6/7); total (6/7) | |||||||||||
CATTCTGTTTGGTAAAGGCGCAATCGCTGGTTTACGCGAACAAATTCCTCACGATGCTCGCGTATTGATTACCTACGGCGGCGGCAGCGTG‑AAAAAAACCGGCGTTCTCGATCAAGTTCTGGATGCCCTGAAAGGCATGGACGTGCTGGAATTTGGCGGTATTGAGCCAAACCC > NZ_CP009273/3148746‑3148919 | cATTCTGTTTGGTAAAGGCGCAATCGCTGGTTTACGCGAACAAATTCCTCACGATGCTCGCGTATTGATTACCTACGGCGGCGGCAGCGTg > 1:35592/1‑91 (MQ=255)cATTCTGTTTGGTAAAGGCGCAATCGCTGGTTTACGCGAACAAATTCCTCACGATGCTCGCGTATTGATTACCTACGGCGGCGGCAGCGTg > 2:710900/1‑91 (MQ=255)cATTCTGTTTGGTAAAGGCGCAATCGCTGGTTTACGCGAACAAATTCCTCACGATGCTCGCGTATTGATTACCTACGGCGGCGGCAGCGTg > 2:770059/1‑91 (MQ=255) cTGTTTGGTAAAGGCGCAATCGCTGGTTTACGCGAACAAATTCCTCACGATGCTCGCGTATTGATTACCTACGGCGGCGGCAGCGTG‑aaaa > 2:28379/1‑91 (MQ=255) gTTTGGTAAAGGCGCAATCGCTGGTTTACGCGAACAAATTCCTCACGATGCTCGCGTATTGATTACCTACGGCGGCGGCAGCGTG‑aaaaaa > 1:651376/1‑91 (MQ=255) gTTTGGTAAAGGCGCAATCGCTGGTTTACGCGAACAAATTCCTCACGATGCTCGCGTATTGATTACCTACGGCGGCGGCAGCGTG‑aaaaaa > 2:669022/1‑91 (MQ=255) cGCTGGTTTACGCGAACAAATTCCTCACGATGCTCGCGTATTGATTACCTACGGCGGCGGCAGCGTGAAAAAAAACCGGCGTTCTCGATCa < 2:637687/91‑1 (MQ=255) aCGCGAACAAATTCCTCACGATGCTCGCGTATTGATTACCTACGGCGGCGGCAGCGTGAAAAAAAACCGGCGTTCTCGATCAAGTTCTGGa < 2:168132/91‑1 (MQ=255) aCGCGAACAAATTCCTCACGATGCTCGCGTATTGATTACCTACGGCGGCGGCAGCGTGAAAAAAAACCGGCGTTCTCGATCAAGTTCTGGa < 2:605860/91‑1 (MQ=255) cgcgAACAAATTCCTCACGATGCTCGCGTATTGATTACCTACGGCGGCGGCAGCGTGAAAAAAAACCGGCGTTCTCGATCAAGTTCTgggt > 1:585562/1‑89 (MQ=255) aaaTTCCTCACGATGCTCGCGTATTGATTACCTACGGCGGCGGCAGCGTGAAAAAAAACCGGCGTTCTCGATCAAGTTCTGGATGCCCTGa < 2:217338/91‑1 (MQ=255) aaaTTCCTCACGATGCTCGCGTATTGATTACCTACGGCGGCGGCAGCGTGAAAAAAAACCGGCGTTCTCGATCAAGTTCTGGATGCCCTGa < 2:604351/91‑1 (MQ=255) aaaTTCCTCACGATGCTCGCGTATTGATTACCTACGGCGGCGGCAGCGTGAAAAAAAACCGGCGTTCTCGATCAAGTTCTGGATGCCCTGa < 2:655027/91‑1 (MQ=255) tCACGATGCTCGCGTATTGATTACCTACGGCGGCGGCAGCGTGAAAAAAAACAGGCGTTCTCGATCTAGTTCTGGATGCCCTGAAAGGCAt > 1:234664/1‑91 (MQ=255) cTCGCGTATTGATTACCTACGGCGGCGGCAGCGTGAAAAAAAACCGGCGTTCTCGATCAAGTTCTGGATGCCCTGAAAGGCATGGACGTGc > 2:806661/1‑91 (MQ=255) aTTGATTACCTACGGCGGCGGCAGCGTGAAAAAAAACCCGCGGTTTCGGATAACATGCGGTTGCCCCGAAAGGCATGGAAGGGCTGGCAtt > 2:318958/1‑91 (MQ=255) ggcggcggcAGCGTGAAAAAAAACCGGCGTTCTCGATCAAGTTCTGGATGCCCTGAAAGGCATGGACGTGCTGGAATTTGGCGGTATTGAg > 2:97237/1‑91 (MQ=255) gcggcggcAGCGTGAAAAAAAACCGGCGTTCTCGATCAAGTTCTGGATGCCCTGAAAGGCATGGACGTGCTGGAATTTGGCGGTATTGAGc < 2:360078/91‑1 (MQ=255) gcggcAGCGTGAAAAAAAACCGGCGTTCTCGATCAAGTTCTGGATGCCCTGAAAGGCATGGACGTGCTGGAATTTGGCGGTATTGAGCCaa > 2:522214/1‑91 (MQ=255) cAGCGTGAAAAAAAACCGGCGTTCTCGATCAAGTTCTGGATGCCCTGAAAGGCATGGACGTGCTGGAATTTGGCGGTATTGAGCCAAAccc < 2:176356/91‑1 (MQ=255) | CATTCTGTTTGGTAAAGGCGCAATCGCTGGTTTACGCGAACAAATTCCTCACGATGCTCGCGTATTGATTACCTACGGCGGCGGCAGCGTG‑AAAAAAACCGGCGTTCTCGATCAAGTTCTGGATGCCCTGAAAGGCATGGACGTGCTGGAATTTGGCGGTATTGAGCCAAACCC > NZ_CP009273/3148746‑3148919 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |