| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 1,856,434 | A→G | S85P (TCA→CCA) | msrB ← | peptide‑methionine (R)‑S‑oxide reductase MsrB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,856,434 | 0 | A | G | 100.0% | 79.9 / NA | 22 | S85P (TCA→CCA) | msrB | peptide‑methionine (R)‑S‑oxide reductase MsrB |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (8/14); total (8/14) | |||||||||||
CCCGTTGGCTGCGGCCCGTCGGGGAAGACATGCCCCAGATGGGCATCACAGTTACCGCAACGAATTTCTATGCGCTGCATTCCATGTGACAAGTCTTTGATATAACGAATGGATTCTTCACTTACCGGTTCGTAGAAACTGGGCCAGCCACAGCCGGAATCATACTTGGTTTGGG > NZ_CP009273/1856346‑1856520 | cccGTTGGCTGCGGCCCGTCGGGGAAGACATGCCCCAGATGGGCATCACAGTTACCGCAACGAATTTCTATGCGCTGCATTCCATGTGGCa < 1:351975/91‑1 (MQ=255)cccGTTGGCTGCGGCCCGTCGGGGAAGACATGCCCCAGATGGGCATCACAGTTACCGCAACGAATTTCTATGCGCTGCATTCCATGTGGCa < 1:45128/91‑1 (MQ=255)cccGTTGGCTGCGGCCCGTCGGGGAAGACATGCCCCAGATGGGCATCACAGTTACCGCAACGAATTTCTATGCGCTGCATTCCATGTGGCa < 2:539135/91‑1 (MQ=255) ccGTTGGCTGCGGCCCGTCGGGGAAGACATGCCCCAGATGGGCATCACAGTTACCGCAACGAATTTCTATGCGCTGCATTCCATGTGGCaa < 1:33595/91‑1 (MQ=255) ccGTTGGCTGCGGCCCGTCGGGGAAGACATGCCCCAGATGGGCATCACAGTTACCGCAACGAATTTCTATGCGCTGCATTCCATGTGGCaa < 2:457920/91‑1 (MQ=255) gCGGCCCGTCGGGGAAGACATGCCCCAGATGGGCATCACAGTTACCGCAACGAATTTCTATGCGCTGCATTCCATGTGGCAAGTCTTTGat > 2:625327/1‑91 (MQ=255) gCCCGTCGGGGAAGACATGCCCCAGATGGGCATCACAGTTACCGCAACGAATTTCTATGCGCTGCATTCCATGTGGCAAGTCTTTGAtata < 2:654800/91‑1 (MQ=255) ccGTCGGGGAAGACATGCCCCAGATGGGCATCACAGTTACCGCAACGAATTTCTATGCGCTGCATTCCATGTGGCAAGTCTTTGATATAAc < 1:9600/91‑1 (MQ=255) aTGGGCATCACAGTTACCGCAACGAATTTCTATGCGCTGCATTCCATGTGGCAAGTCTTTGATATAACGAATGGATTCTTCACTTACCGGt < 2:344764/91‑1 (MQ=255) gCATCACAGTTACCGCAACGAATTTCTATGCGCTGCATTCCATGTGGCAAGTCTTTGATATAACGAATGGATTCTTCACTTACCGGTTCGt > 2:728799/1‑91 (MQ=255) gCATCACAGTTACCGCAACGAATTTCTATGCGCTGCATTCCATGTGGCAAGTCTTTGATATAACGAATGGATTCTTCACTTACCGGTTCGt > 1:686928/1‑91 (MQ=255) gTTACCGCAACGAATTTCTATGCGCTGCATTCCATGTGGCa < 2:547066/41‑1 (MQ=255) gTTACCGCAACGAATTTCTATGCGCTGCATTCCATGTGGCAAGTCTTTGATATAACGAATGGATTCTTCACTTACCGGTTCGTAGAAACTg > 2:793600/1‑91 (MQ=255) ttACCGCAACGAATTTCTATGCGCTGCATTCCATGTGGCAAGTCTTTGATATAACGAATGGATTCTTCACTTACCGGTTCGTAGAAACTgg > 2:60266/1‑91 (MQ=255) ccGCAACGAATTTCTATGCGCTGCATTCCATGTGGCAAGTCTTTGATATAACGAATGGATTCTTCACTTACCGGTTCGTAGAAACTGGgcc < 1:168494/91‑1 (MQ=255) aaCGAATTTCTATGCGCTGCATTCCATGTGGCAAGTCTTTGATATAACGAATGGATTCTTCACTTACCGGTTCGTAGAAACTGGgccagcc > 1:161173/1‑91 (MQ=255) gAATTTCTATGCGCTGCATTCCATGTGGCAAGTCTTTGATATAACGAATGGATTCTTCACTTACCGGTTCGTAGAAACTGGGCCAGCcaca < 2:870886/91‑1 (MQ=255) tCTATGCGCTGCATTCCATGTGGCAAGTCTTTGATATAACGAATGGATTCTTCACTTACCGGTTCGTAGAAACTGGGCCAGCCACAGCCgg < 2:710018/91‑1 (MQ=255) cTGCATTCCATGTGGCAAGTCTTTGATATAACGAATGGATTCTTCGCTTACCGGCTCGTAGAAACGGGGCCAGCCACAGCCGGAATCATAc < 2:247064/91‑1 (MQ=255) cTGCATTCCATGTGGCAAGTCTTTGATATAACGAATGGATTCTTCACTTACCGGTTCGTAGAAACTGGGCCAGCCACAGCCGGAATCATAc > 2:770580/1‑91 (MQ=255) ccATGTGGCAAGTCTTTGATATAACGAATGGATTCTTCACTTACCGGTTCGTAGAAACTGGGCCAGCCACAGCCGGAATCATACTTGGttt > 1:724795/1‑91 (MQ=255) cATGTGGCAAGTCTTTGATATAACGAATGGATTCTTCACTTACCGGTTCGTAGAAACTGGGCCAGCCACAGCCGGAATCATACTTGGTTTg < 1:860977/91‑1 (MQ=255) tgtgGCAAGTCTTTGATATAACGAATGGATTCTTCACTTACCGGTTCGTAGAAACTGGGCCAGCCACAGCCGGAATCATACTTGGTTTggg < 1:513666/91‑1 (MQ=255) | CCCGTTGGCTGCGGCCCGTCGGGGAAGACATGCCCCAGATGGGCATCACAGTTACCGCAACGAATTTCTATGCGCTGCATTCCATGTGACAAGTCTTTGATATAACGAATGGATTCTTCACTTACCGGTTCGTAGAAACTGGGCCAGCCACAGCCGGAATCATACTTGGTTTGGG > NZ_CP009273/1856346‑1856520 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |