| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 243,919 | A→T | R241W (AGG→TGG) | yafL → | C40 family peptidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 243,919 | 0 | A | T | 100.0% | 66.1 / NA | 18 | R241W (AGG→TGG) | yafL | C40 family peptidase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (8/10); total (8/10) | |||||||||||
TCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGA > NZ_CP009273/243836‑244003 | tCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGCCCATTTTTTTGGCGCGCGCTGGAtttt > 2:784209/1‑91 (MQ=255) tCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCTGGATTTTGACgg > 2:130892/1‑91 (MQ=255) gTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCTGGATTTTGACGGAAGAGAc < 2:481531/91‑1 (MQ=255) ccGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCTGGATTTTGACGGAAGAGACGAt < 2:302213/91‑1 (MQ=255) gAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCTGGATTTTGACGGAagag < 1:329788/81‑1 (MQ=255) gAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCTGGATTTTGACGGAagag > 2:329788/1‑81 (MQ=255) aaaCCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCTGGATTTTGACGGAAGAGACGATTTTGTa > 2:564261/1‑91 (MQ=255) cATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCTGGATTTTGACGGAAGAGACGATTTTGTAGGAc < 1:818995/91‑1 (MQ=255) cATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCTGGATTTTGACGGAAGAGACGATTTTGTAGGAc < 1:58302/91‑1 (MQ=255) ttCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCTGGATTTTGACGGAAGAGACGATTTTGTAGGACgg > 2:647301/1‑91 (MQ=255) ggATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCTGGATTTTGACGGAAGAGACGATTTTGTAGGACGGATa < 2:171256/91‑1 (MQ=255) ggATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCTGGATTTTGACGGAAGAGACGATTTTGTAGGACGGATa < 1:679557/91‑1 (MQ=255) aaGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCTGGATTTTGACGGAAGAGAc < 1:68319/69‑1 (MQ=255) aaGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCTGGATTTTGACGGAAGAGAc > 2:68319/1‑69 (MQ=255) cGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCTGGATTTTGACGGAAGAGACGATTTTGTAGGACGGATAAGGCGTTTACGCCGCa > 1:317427/1‑91 (MQ=255) ccATTTTTTGGGCGCGCGCTGGATTTTGACGGAAGAGACGATTTTGTAGGACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAg < 2:174804/91‑1 (MQ=255) gcgcgcgcTGGATTTTGACGGAAGAGACGATTTTGTAGGACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGc > 2:384147/1‑91 (MQ=255) gcgcgcgcTGGATTTTGACGGAAGAGACGATTTTGTAGGACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGc < 1:384147/91‑1 (MQ=255) gcgcgcTGGATTTTGACGGAAGAGACGATTTTGTAGGACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGa > 2:239293/1‑91 (MQ=255) | TCGAGTCGCCACGTACCGGCGAAACCATTCGGATAAGCCGATTAGCCGAACCTTTCTGGCAGGACCATTTTTTGGGCGCGCGCAGGATTTTGACGGAAGAGACGATTTTGTAGGACGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGA > NZ_CP009273/243836‑244003 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |