| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 2,037,050 | T→G | intergenic (‑12/‑82) | BW25113_RS10320 ← / → mtfA | tRNA‑Ser/DgsA anti‑repressor MtfA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 2,037,050 | 0 | T | G | 100.0% | 67.2 / NA | 19 | intergenic (‑12/‑82) | BW25113_RS10320/mtfA | tRNA‑Ser/DgsA anti‑repressor MtfA |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (10/9); total (10/9) | |||||||||||
TGAACCCCCGGTAGAGTTGCCCCTACTCCGGTTTTCGAGACCGGTCCGTTCAGCCGCTCCGGCATCTCTCCGTTCAGATGGTTGCCATGATGCCAGGAAATTTGGCATTTTAACAGTCCCTGTCCGTGCAATTTTGTTCAAGTGACGAGTTTGCGAGCAAAACGATGA > NZ_CP009273/2036968‑2037135 | tGAACCCCCGGTAGAGTTGCCCCTACTCCGGTTTTCGAGACCGGTCCGTTCAGCCGCTCCGGCATCTCTCCGTTCAGATGGTGGCCatgat > 2:21269/1‑91 (MQ=255) cccGGTAGAGTTGCCCCTACTCCGGTTTTCGAGACCGGTCCGTTCAGCCGCTCCGGCATCTCTCCGTTCAGATGGTGGCCATGATGCCAgg > 1:211398/1‑91 (MQ=255) cGGTAGAGTTGCCCCTACTCCGGTTTTCGAGACCGGTCCGTTCAGCCGCTCCGGCATCTCTCCGTTCAGATGGTGGCCATGATGCCAGGaa > 1:842392/1‑91 (MQ=255) ccccTACTCCGGTTTTCGAGACCGGTCCGTTCAGCCGCTCCGGCATCTCTCCGTTCAGATGGTGGCCATGATGCCAGGAAATTTGGCAttt > 2:485543/1‑91 (MQ=255) tACTCCGGTTTTCGAGACCGGTCCGTTCAGCCGCTCCGGCATCTCTCCGTTCAGATGGTGGCCATGATGCCAGGAAATTTGGCATTTTAAc > 1:807333/1‑91 (MQ=255) tACTCCGGTTTTCGAGACCGGTCCGTTCAGCCGCTCCGGCATCTCTCCGTTCAGATGGTGGCCATGATGCCAGGAAATTTGGCATTTTAAc < 2:842392/91‑1 (MQ=255) tACTCCGGTTTTCGAGACCGGTCCGTTCAGCCGCTCCGGCATCTCTCCGTTCAGATGGTGGCCATGATGCCAGGAAATTTGGCATTTTAAc < 2:59617/91‑1 (MQ=255) tACTCCGGTTTTCGAGACCGGTCCGTTCAGCCGCTCCGGCATCTCTCCGTTCAGATGGTGGCCATGATGCCAGGAAATTTGGCATTTTAAc < 1:554062/91‑1 (MQ=255) tACTCCGGTTTTCGAGACCGGTCCGTTCAGCCGCTCCGGCATCTCTCCGTTCAGATGGTGGCCATGATGCCAGGAAATTTGGCATTTTAAc < 1:212276/91‑1 (MQ=255) tACTCCGGTTTTCGAGACCGGTCCGTTCAGCCGCTCCGGCATCGCTCCGTTCAGATGGTGGCCATGATGCCAGGAAATTTGGCATTTTAAc < 1:134562/91‑1 (MQ=255) ttCGAGACCGGTCCGTTCAGCCGCTCCGGCATCTCTCCGTTCAGATGGTGGCCATGATGCCAGGAAATTTGGCATTTTAACAGTCCCTGTc < 1:10807/91‑1 (MQ=255) gaCCGGTCCGTTCAGCCGCTCCGGCATCTCTCCGTTCAGATGGTGGCCATGATGCCAGGAAATTTGGCATTTTAACAGTCCCTGTCCGTGc < 1:199570/91‑1 (MQ=255) ggTCCGTTCAGCCGCTCCGGCATCTCTCCGTTCAGATGGTGGCCATGATGCCAGGAAATTTGGCATTTTAACAGTCCCTGTCCGTGCAAtt > 2:103113/1‑91 (MQ=255) cAGCCGCTCCGGCATCTCTCCGTTCAGATGGTGGCCATGATGCCAGGAAATTTGGCATTTTAACAGTCCCTGTCCGTGCAATTTTGTTCaa < 2:807333/91‑1 (MQ=255) gCTCCGGCATCTCTCCGTTCAGATGGTGGCCATGATGCCAGGAAATTTGGCATTTTAACAGTCCCTGTCCGTGCAATTTTGTTCAAGTGAc > 2:104064/1‑91 (MQ=255) ggCATCTCTCCGTTCAGATGGTGGCCATGATGCCAGGAAATTTGGCATTTTAACAGTCCCTGTCCGTGCAATTTTGTTCAAGTGACGAGtt > 1:698931/1‑91 (MQ=255) ctctcCGTTCAGATGGTGGCCATGATGCCAGGAAATTTGGCATTTTAACAGTCCCTGTCCGTGCAATTTTGTTCAAGTGACGAGTTTGCGa > 2:417747/1‑91 (MQ=255) tctcCGTTCAGATGGTGGCCATGATGCCAGGAAATTTGGCATTTTAACAGTCCCTGTCCGTGCAATTTTGTTCAAGTGACGAGTTTGCGAg > 1:12788/1‑91 (MQ=255) aTGGTGGCCATGATGCCAGGAAATTTGGCATTTTAACAGTCCCTGTCCGTGCAATTTTGTTCAAGTGACGAGTTTGCGAGCAAAACgatga < 1:21269/91‑1 (MQ=255) | TGAACCCCCGGTAGAGTTGCCCCTACTCCGGTTTTCGAGACCGGTCCGTTCAGCCGCTCCGGCATCTCTCCGTTCAGATGGTTGCCATGATGCCAGGAAATTTGGCATTTTAACAGTCCCTGTCCGTGCAATTTTGTTCAAGTGACGAGTTTGCGAGCAAAACGATGA > NZ_CP009273/2036968‑2037135 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |