| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 2,088,811 | T→C | V69A (GTC→GCC) | hisA → | 1‑(5‑phosphoribosyl)‑5‑[(5‑ phosphoribosylamino)methylideneamino]imidazole‑4‑ carboxamide isomerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 2,088,811 | 0 | T | C | 100.0% | 108.7 / NA | 30 | V69A (GTC→GCC) | hisA | 1‑(5‑phosphoribosyl)‑5‑[(5‑ phosphoribosylamino)methylideneamino]imidazole‑4‑ carboxamide isomerase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (20/10); total (20/10) | |||||||||||
GCGCAGGGTGCCGAAGTGCTGCACCTGGTGGATCTGACCGGGGCAAAAGATCCGGCTAAACGTCAAATCCCGCTGATTAAAACCCTGGTCGCGGGCGTTAACGTTCCGGTGCAGGTTGGCGGCGGCGTGCGTAGCGAAGAAGATGTGGCGGCGTTACTGGAAGCGGGCGTTGCGC > NZ_CP009273/2088723‑2088897 | gcgcAGGGTGCCGAAGTGCTGCACCTGGTGGATCTGACCGGGGCAAAAGATCCGGCTAAACGTCAAATCCCGCTGATTAAAACCCTGGCcg > 2:315100/1‑91 (MQ=255) cgcAGGGTGCCGAAGTGCTGCACCTGGTGGATCTGACCGGGGCAAAAGATCCGGCTAAACGTCAAATCCCGCTGATTAAAACCCTGGCcgc < 2:640346/91‑1 (MQ=255) cgcAGGGTGCCGAAGTGCTGCACCTGGTGGATCTGACCGGGGCAAAAGATCCGGCTAAACGTCAAATCCCGCTGATTAAAACCCTGGCcgc < 1:755417/91‑1 (MQ=255) gcAGGGTGCCGAAGTGCTGCACCTGGTGGATCTGACCGGGGCAAAAGATCCGGCTAAACGTCAAATCCCGCTGATTAAAACCCTGGCcgcg > 1:690204/1‑91 (MQ=255) gcAGGGTGCCGAAGTGCTGCACCTGGTGGATCTGACCGGGGCAAAAGATCCGGCTAAACGTCAAATCCCGCTGATTAAAACCCTGGCcgcg > 1:671211/1‑91 (MQ=255) tGCCGAAGTGCTGCACCTGGTGGATCTGACCGGGGCAAAAGATCCGGCTAAACGTCAAATCCCGCTGATTAAAACCCTGGCCGCGGGCGtt < 2:145140/91‑1 (MQ=255) tGCCGAAGTGCTGCACCTGGTGGATCTGACCGGGGCAAAAGATCCGGCTAAACGTCAAATCCCGCTGATTAAAACCCTGGCCGCGGGCGtt < 1:594479/91‑1 (MQ=255) ccGAAGTGCTGCACCTGGTGGATCTGACCGGGGCAAAAGATCCGGCTAAACGTCAAATCCCGCTGATTAAAACCCTGGCCGCGGGCGTTaa > 1:262441/1‑91 (MQ=255) ccGAAGTGCTGCACCTGGTGGATCTGACCGGGGCAAAAGATCCGGCTAAACGTCAAATCCCGCTGATTAAAACCCTGGCCGCGGGCGTTaa > 2:183445/1‑91 (MQ=255) cGAAGTGCTGCACCTGGTGGATCTGACCGGGGCAAAAGATCCGGCTAAACGTCAAATCCCGCTGATTAAAACCCTGGCCGCGGGCGTTAAc < 1:97185/91‑1 (MQ=255) gTGCTGCACCTGGTGGATCTGACCGGGGCAAAAGATCCGGCTAAACGTCAAATCCCGCTGATTAAAACCCTGGCCGCGGGCGTTAACGTTc > 1:499131/1‑91 (MQ=255) gTGCTGCACCTGGTGGATCTGACCGGGGCAAAAGATCCGGCTAAACGTCAAATCCCGCTGATTAAAACCCTGGCCGCGGGCGTTAACGTTc > 2:653037/1‑91 (MQ=255) gctgcACCTGGTGGATCTGACCGGGGCAAAAGATCCGGCTAAACGTCAAATCCCGCTGATTAAAACCCTGGCCGCGGGCGTTAACGTTCCg > 2:82666/1‑91 (MQ=255) gctgcACCTGGTGGATCTGACCGGGGCAAAAGATCCGGCTAAACGTCAAATCCCGCTGATTAAAACCCTGGCCGCGGGCGTTAACGTTCCg > 2:116913/1‑91 (MQ=255) gctgcACCTGGTGGATCTGACCGGGGCAAAAGATCCGGCTAAACGTCAAATCCCGCTGATTAAAACCCTGGCCGCGGGCGTTAACGTTCCg > 1:416718/1‑91 (MQ=255) cACCTGGTGGATCTGACCGGGGCAAAAGATCCGGCTAAACGTCAAATCCCGCTGATTAAAACCCTGGCCGCGGGCGTTAACGTTCCGGTGc < 1:435182/91‑1 (MQ=255) gATCTGACCGGGGCAAAAGATCCGGCTAAACGTCAAATCCCGCTGATTAAAACCCTGGCCGCGGGCGTTAACGTTCCGGTGCAGGTTggcg > 2:220564/1‑91 (MQ=255) gACCGGGGCAAAAGATCCGGCTAAACGTCAAATCCCGCTGATTAAAACCCTGGCcgc < 1:418690/57‑1 (MQ=255) gACCGGGGCAAAAGATCCGGCTAAACGTCAAATCCCGCTGATTAAAACCCTGGCcgc > 2:418690/1‑57 (MQ=255) gACCGGGGCAAAAGATCCGGCTAAACGTCAAATCCCGCTGATTAAAACCCTGGCCGCGGGCGTTAACGTTCGGGTGCAGGTTagcggcggc > 1:816601/1‑91 (MQ=255) aCCGGGGCAAAAGATCCGGCTAAACGTCAAATCCCGCTGATTAAAACCCTGGCCGCGGGCGTTAACGTTCCGGTGCAGGTTGgcggcggcg > 2:99408/1‑91 (MQ=255) gggCAAAAGATCCGGCTAAACGTCAAATCCCGCTGATTAAAACCCTGGCCGCGGGCGTTAACGTTCCGGTGCAGGTTGGCGGCGgcgtgcg > 1:685964/1‑91 (MQ=255) cAAAAGATCCGGCTAAACGTCAAATCCCGCTGATTAAAACCCTGGCCGCGGGCGTTAACGTTCCGGTGCAGGTTGGCGGCGGCGTGCGTAg < 1:377394/91‑1 (MQ=255) aaaGATCCGGCTAAACGTCAAATCCCGCTGATTAAAACCCTGGCCGCGGGCGTTAACGTTCCGGTGCAGGTTGGCGGCGGCGTGCGTAGCg > 2:551895/1‑91 (MQ=255) aaCGTCAAATCCCGCTGATTAAAACCCTGGCCGCGGGCGTTAACGTTCCGGTGCAGGTTGGCGGCGGCGTGCGTAGCGAAGAAGATGTggc < 1:408314/91‑1 (MQ=255) aaCGTCAAATCCCGCTGATTAAAACCCTGGCCGCGGGCGTTAACGTTCCGGGGCAGGTTGGCGGGGGCGGGGGTGGCGAGGAGGATGTggg > 2:84015/1‑90 (MQ=255) aaCCCTGGCCGCGGGCGTTAACGTTCCGGTGCAGGTTGGCGGCGGCGTGCGTAGCGAAGAAGATGTGGCGGCGTTACTGGAAGCGGGCGtt < 1:688857/91‑1 (MQ=255) cTGGCCGCGGGCGTTAACGTTCCGGTGCAGGTTGGCGGCGGCGTGCGTAGCGAAGAAGATGTGGCGGCGTTACTGGAAGCGGGCGTTgcgc > 2:495153/1‑91 (MQ=255) cTGGCCGCGGGCGTTAACGTTCCGGTGCAGGTTGGCGGCGGCGTGCGTAGCGAAGAAGATGTGGCGGCGTTACTGGAAGCGGGCGTTgcgc > 2:764610/1‑91 (MQ=255) cTGGCCGCGGGCGTTAACGTTCCGGTGCAGGTTGGCGGCGGCGTGCGTAGCGAAGAAGATGTGGCGGCGTTACTGGAAGCGGGCGTTgcgc > 1:198359/1‑91 (MQ=255) | GCGCAGGGTGCCGAAGTGCTGCACCTGGTGGATCTGACCGGGGCAAAAGATCCGGCTAAACGTCAAATCCCGCTGATTAAAACCCTGGTCGCGGGCGTTAACGTTCCGGTGCAGGTTGGCGGCGGCGTGCGTAGCGAAGAAGATGTGGCGGCGTTACTGGAAGCGGGCGTTGCGC > NZ_CP009273/2088723‑2088897 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |