| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 2,303,411 | T→C | G158G (GGA→GGG) | ada ← | bifunctional DNA‑binding transcriptional regulator/O6‑methylguanine‑DNA methyltransferase Ada |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 2,303,411 | 0 | T | C | 100.0% | 40.6 / NA | 12 | G158G (GGA→GGG) | ada | bifunctional DNA‑binding transcriptional regulator/O6‑methylguanine‑DNA methyltransferase Ada |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (5/7); total (5/7) | |||||||||||
TTTCGCCACCGTGACGGAATTGTTTAGCCGTCATGCCCAGCGTTTCGTCAGCTTTGCGATAGTAACTGCTGCTGTCGGGGAATCCGGCGTTAAGAATAGACGTCGTCACGCTCTCCCCTTTCGCCAGCGATTCGCGCAAACGGCGAGCGCGCCAGGCCTGTTGCC > NZ_CP009273/2303329‑2303493 | tttCGCCACCGTGACGGAATTGTTTAGCCGTCATGCCCAGCGTTTCGTCAGCTTTGCGATAGTAACTGCTGCTGTCGGGGAACCCGGCGtt < 1:19958/91‑1 (MQ=255) ttCGCCACCGTGACGGAATTGTTTAGCCGTCATGCCCAGCGTTTCGTCAGCTTTGCGATAGTAACTGCTGCTGTCGGGGAACCCGGCGTTa < 2:47859/91‑1 (MQ=255) ttCGCCACCGTGACGGAATTGTTTAGCCGTCATGCCCAGCGTTTCGTCAGCTTTGCGATAGTAACTGCTGCTGTCGGGGAACCCGGCGTTa < 2:594808/91‑1 (MQ=255) cATGCCCAGCGTTTCGTCAGCTTTGCGATAGTAACTGCTGCTGTCGGGGAACCCGGCGTTAAGAATAGACGTCGTCACGCTCTCCCCTTTc > 2:372997/1‑91 (MQ=255) ttGCGATAGTAACTGCTGCTGTCGGGGAACCCGGCGTTAAGAATAGACGTCGTCACGCTCTCCCCTTTCGCCAGCGATTCGCGCAAACGGc > 1:599746/1‑91 (MQ=255) gCGATAGTAACTGCTGCTGTCGGGGAACCCGGCGTTa < 1:230352/37‑1 (MQ=38) gCGATAGTAACTGCTGCTGTCGGGGAACCCGGCGTTa > 2:230352/1‑37 (MQ=38) gATAGTAACTGCTGCTGTCGGGGAACCCGGCGTTAAGAATAGACGTCGTCACGCTCTCCCCTTTCGCCAGCGATTCGCGCAAACGGCGAgc < 1:354158/91‑1 (MQ=255) ctgctgTCGGGGAACCCGGCGTTAAGAATAGACGTCGTCACGCTCTCCCCTTTCGCCAGCGATTCGCGCaa < 1:107389/71‑1 (MQ=255) ctgctgTCGGGGAACCCGGCGTTAAGAATAGACGTCGTCACGCTCTCCCCTTTCGCCAGCGATTCGCGCaa > 2:107389/1‑71 (MQ=255) tgctgTCGGGGAACCCGGCGTTAAGAATAGACGTCGTCACGCTCTCCCCTTTCGCCAGCGATTCGCGCAAACGGCGAGCGCGCCAGGCCTg > 2:735799/1‑91 (MQ=255) tCGGGGAACCCGGCGTTAAGAATAGACGTCGTCACGCTCTCCCCTTTCGCCAGCGATTCGCGCAAACGGCGAGCGCGCCAGGCCTGTTGcc < 2:666221/91‑1 (MQ=255) | TTTCGCCACCGTGACGGAATTGTTTAGCCGTCATGCCCAGCGTTTCGTCAGCTTTGCGATAGTAACTGCTGCTGTCGGGGAATCCGGCGTTAAGAATAGACGTCGTCACGCTCTCCCCTTTCGCCAGCGATTCGCGCAAACGGCGAGCGCGCCAGGCCTGTTGCC > NZ_CP009273/2303329‑2303493 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |