| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 2,644,099 | T→G | A516A (GCA→GCC) | yfhM ← | alpha2‑macroglobulin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 2,644,099 | 0 | T | G | 100.0% | 71.4 / NA | 20 | A516A (GCA→GCC) | yfhM | alpha2‑macroglobulin |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (9/11); total (9/11) | |||||||||||
CGAATTCAAAACCAGGTAAGGCTGACACAGCTTCACGCAGTGGGCGCAGGAAAAGTTGCCCTTGCAAAGTATTACCATTAGCAGGTGCACCATACAGGTAGTACCCCACCACGGAGAATTTCACTTCATCTTTCGGCGTTAGCGGGGTTTTCTCACCGGTCAGATTCAG > NZ_CP009273/2644014‑2644182 | cGAATTCAAAACCAGGTAAGGCTGACACAGCTTCACGCAGTGGGCGCAGGAAAAGTTGCCCTTGCAAAGTATTACCATTAGCAGGGGCAcc > 1:640207/1‑91 (MQ=255)cGAATTCAAAACCAGGTAAGGCTGACACAGCTTCACGCAGTGGGCGCAGGAAAAGTTGCCCTTGCAAAGTATTACCATTAGCAGGGGCAcc < 2:181973/91‑1 (MQ=255)cGAATTCAAAACCAGGAAAGGCTGACACAGCTTCACGCCGTGGGCGCAGGAAAAGTTGCCCTTGCAAAGTATTACCATTATCAGGGGCAcc > 2:667638/1‑91 (MQ=255) ttCAAAACCAGGTAAGGCTGACACAGCTTCACGCAGTGGGCGCAGGAAAAGTTGCCCTTGCAAAGTATTACCATTAGCAGGGGCACCATAc < 1:596383/91‑1 (MQ=255) cAAAACCAGGTAAGGCTGACACAGCTTCACGCAGTGGGCGCAGGAAAAGTTGCCCTTGCAAAGTATTACCATTAGCAGGGGCACCATACAg < 2:187273/91‑1 (MQ=255) aaaCCAGGTAAGGCTGACACAGCTTCACGCAGTGGGCGCAGGAAAAGTTGCCCTTGCAAAGTATTTCCATTAGCAGGGGCACCATACAGgt < 2:430383/91‑1 (MQ=255) cTGACACAGCTTCACGCAGTGGGCGCAGGAAAAGTTGCCCTTGCAAAGTATTACCATTAGCAGGGGCACCATACAGGTAGTACCCcaccac < 1:509672/91‑1 (MQ=255) gCTTCACGCAGTGGGCGCAGGAAAAGTTGCCCTTGCAAAGTATTACCATTAGCAGGGGCACCATACAGGTAGTACCCCACCACGGAGAAtt > 2:230188/1‑91 (MQ=255) aCGCAGTGGGCGCAGGAAAAGTTGCCCTTGCAAAGTATTACCATTAGCAGGGGCACCATACAGGTAGTACCCCACCACGGAGAATTTCACt > 1:486180/1‑91 (MQ=255) gTGGGCGCAGGAAAAGTTGCCCTTGCAAAGTATTACCATTAGCAGGGGCACCATACAGGTAGTACCCCACCACGGAGAATTTCACTTCATc > 1:837916/1‑91 (MQ=255) gTGGGCGCAGGAAAAGTTGCCCTTGCAAAGTATTACCATTAGCAGGGGCACCATACAGGTAGTACCCCACCACGGAGAATTTCACTTCATc > 2:847655/1‑91 (MQ=255) gcgcAGGAAAAGTTGCCCTTGCAAAGTATTACCATTAGCAGGGGCACCATACAGGTAGTACCCCACCACGGAGAATTTCACTTCATCTTTc > 2:486814/1‑91 (MQ=255) gTTGCCCTTGCAAAGTATTACCATTAGCAGGGGCACCATACAGGTAGTACCCCACCACGGAGAATTTCACTTCATCTTTCGGCGTTAGCgg < 2:621020/91‑1 (MQ=255) cccTTGCAAAGTATTACCATTAGCAGGGGCACCATACAGGTAGTACCCCACCACgg > 1:860595/1‑56 (MQ=255) cccTTGCAAAGTATTACCATTAGCAGGGGCACCATACAGGTAGTACCCCACCACgg < 2:860595/56‑1 (MQ=255) aaGTATTACCATTAGCAGGGGCACCATACAGGTAGTACCCCACCACGGAGAATTTCACTTCATCTTTCGGCGTTAGCGGGGTTTTCTCAcc < 1:91739/91‑1 (MQ=255) cATTAGCAGGGGCACCATACAGGTAGTACCCCACCACGGAGAATTTCACTTCATCTTTCGGCGTTAGCGGGGTTTTCTCACCGGTCAGAtt < 1:647429/91‑1 (MQ=255) aTTGGCAGGGGCACCATACAGGTAGTACCCCACCACGGAGAATTTCACTTCATCTTTCGGCGTTAGCGGGGTTTTCTCACCGGTCAGATTc < 2:652850/91‑1 (MQ=255) tAGCAGGGGCACCATACAGGTAGTACCCCACCACGGAGAATTTCACTTCATCTTTCGGCGTTAGCGGGGTTTTCTCACCGGTCAGATTCAg > 1:731680/1‑91 (MQ=255) tAGCAGGGGCACCATACAGGTAGTACCCCACCACGGAGAATTTCACTTCATCTTTCGGCGTTAGCGGGGTTTTCTCACCGGTCAGATTCAg < 1:290820/91‑1 (MQ=255) tAGCAGGGGCACCATACAGGTAGTACCCCACCACGGAGAATTTCACTTCATCTTTCGGCGTTAGCGGGGCTTTCTCACCGGTCGCATTCAg > 2:693906/1‑91 (MQ=255) | CGAATTCAAAACCAGGTAAGGCTGACACAGCTTCACGCAGTGGGCGCAGGAAAAGTTGCCCTTGCAAAGTATTACCATTAGCAGGTGCACCATACAGGTAGTACCCCACCACGGAGAATTTCACTTCATCTTTCGGCGTTAGCGGGGTTTTCTCACCGGTCAGATTCAG > NZ_CP009273/2644014‑2644182 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |