| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 3,681,467 | T→A | Q356L (CAG→CTG) | bcsC ← | cellulose synthase complex outer membrane protein BcsC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 3,681,467 | 0 | T | A | 100.0% | 87.4 / NA | 24 | Q356L (CAG→CTG) | bcsC | cellulose synthase complex outer membrane protein BcsC |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (12/12); total (12/12) | |||||||||||
ACTGTCGGTGTTATCGACATTACGCGCCTGCTGGAACAGGCGTTCTGCCCGGTCAGGATTATTGGCTTTCAGCGCAGCATCGCCCTGCTGGATCGCCAGCCAGTAGCGGTTTACTTTCAGCAGACTGTTCCATTTGTCGTTGTTGCTGCTGTGCGGGTCCAGTGCGAG > NZ_CP009273/3681379‑3681546 | aCTGTCGGTGTTATCGACATTACGCGCCTGCTGGAACAGGCGTTCTGCCCGGTCAGGATTATTGGCTTTCAGCGCAGCATCGCCCTGCAgg < 2:464302/91‑1 (MQ=255)aCTGTCGGTGTTATCGACATTACGCGCCTGCTGGAACAGGCGTTCTGCCCGGTCAGGATTATTGGCTTTCAGCGCAGCATCGCCCTGCAgg > 1:309605/1‑91 (MQ=255) gTCGGTGTTATCGACATTACGCGCCTGCTGGAACAGGCGTTCTGCCCGGTCAGGATTATTGGCTTTCAGCGCAGCATCGCCCTGCAGGATc > 2:28314/1‑91 (MQ=255) gTCGGTGTTATCGACATTACGCGCCTGCTGGAACAGGCGTTCTGCCCGGTCAGGATTATTGGCTTTCAGCGCAGCATCGCCCTGCAGGATc > 1:38565/1‑91 (MQ=255) cGGTGTTATCGACATTACGCGCCTGCTGGAACAGGCGTTCTGCCCGGTCAGGATTATTGGCTTTCAGCGCAGCATCGCCCTGCAGGATCgc < 1:22014/91‑1 (MQ=255) cGGTGTTATCGACATTACGCGCCTGCTGGAACAGGCGTTCTGCCCGGTCAGGATTATTGGCTTTCAGCGCAGCATCGCCCTGCAGGATCgc > 1:794018/1‑91 (MQ=255) tATCGACATTACGCGCCTGCTGGAACAGGCGTTCTGCCCGGTCAGGATTATTGGCTTTCAGCGCAGCATCGCCCTGCAGGATCgccagcca < 1:695712/91‑1 (MQ=255) tATCGACATTACGCGCCTGCTGGAACAGGCGTTCTGCCCGGTCAGGATTATTGGCTTTCAGCGCAGCATCGCCCTGCAGGATCgccagcca > 2:95824/1‑91 (MQ=255) aTCGACATTACGCGCCTGCTGGAACAGGCGTTCTGCCCGGTCAGGATTATTGGCTTTCAGCGCAGCATCGCCCTGCAGGATCGccagccag < 1:674073/91‑1 (MQ=255) cATTACGCGCCTGCTGGAACAGGCGTTCTGCCCGGTCAGGATTATTGGCTTTCAGCGCAGCATCGCCCTGCAGGATCGCCAGCCAGTAGCg > 2:630353/1‑91 (MQ=255) cgcCTGCTGGAACAGGCGTTCTGCCCGGTCAGGATTATTGGCTTTCAGCGCAGCATCGCCCTGCAGGATCGCCAGCCAGTAGCGGTTTACt < 1:512508/91‑1 (MQ=255) aCAGGCGTTCTGCCCGGTCAGGATTATTGGCTTTCAGCGCAGCATCGCCCTGCAGGATCGCCAGCCAGTAGCGGTTTACTTTCAGCAGACt < 2:428337/91‑1 (MQ=255) cAGGCGTTCTGCCCGGTCAGGATTATTGGCTTTCAGCGCAGCATCGCCCTGCAGGATCGCCAGCCAGTAGCGGTTTACTTTCAGCAGACTg < 2:794018/91‑1 (MQ=255) ttCTGCCCGGTCAGGATTATTGGCTTTCAGCGCAGCATCGCCCTGCAGGATCGCCAGCCAGTAGCGGTTTACTTTCAGCAGACTGTTCCAt < 1:186855/91‑1 (MQ=255) gCCCGGTCAGGATTATTGGCTTTCAGCGCAGCATCGCCCTGCAGGATCGCCAGCCAGTAGCGGTTTACTTTCAGCAGACTGTTCCATTTGt > 1:496021/1‑91 (MQ=255) aGGATTATTGGCTTTCAGCGCAGCATCGCCCTGCAGGATCGCCAGCCAGTAGc < 1:734994/53‑1 (MQ=255) aGGATTATTGGCTTTCAGCGCAGCATCGCCCTGCAGGATCGCCAGCCAGTAGc > 2:734994/1‑53 (MQ=255) gATTATTGGCTTTCAGCGCAGCATCGCCCTGCAGGATCGCCAGCCAGTAGCGGTTTACTTTCAGCAGACTGTTCCATTTGTCGTTGTtgct > 2:870791/1‑91 (MQ=255) ttattGGCTTTCAGCGCAGCATCGCCCTGCAGGATCGCCAGCCAGTAGCGGTTTACTTTCAGCAGACTGTTCCATTTGTCGTTGTtgctgc < 1:28314/91‑1 (MQ=255) tttCAGCGCAGCATCGCCCTGCAGGATCGCCAGCCAGTAGCGGTTTACTTTCAGCAGACTGTTCCATTTGTCGTTGTTGCTGCTGTGCggg > 1:647855/1‑91 (MQ=255) tttCAGCGCAGCATCGCCCTGCAGGATCGCCAGCCAGTAGCGGTTTACTTTCAGCAGACTGTTCCATTTGTCGTTGTTGCTGCTGTGCggg > 1:343395/1‑91 (MQ=255) caTCGCCCTGCAGGATCGCCAGCCAGTAGCGGTTTACTTTCAGCAGACTGTTCCATTTGTCGTTGTTGCTGCTGTGCGGGTCCAGTGCGAg < 1:107363/91‑1 (MQ=255) tCGCCCTGCAGGATCGCCAGCCAGTAGCGGTTTACTTTCAGCAGACTGTTCCATTTGTCGTTGTTGCTGCTGTGCGGGTcc > 2:225792/1‑81 (MQ=255) tCGCCCTGCAGGATCGCCAGCCAGTAGCGGTTTACTTTCAGCAGACTGTTCCATTTGTCGTTGTTGCTGCTGTGCGGGTcc < 1:225792/81‑1 (MQ=255) | ACTGTCGGTGTTATCGACATTACGCGCCTGCTGGAACAGGCGTTCTGCCCGGTCAGGATTATTGGCTTTCAGCGCAGCATCGCCCTGCTGGATCGCCAGCCAGTAGCGGTTTACTTTCAGCAGACTGTTCCATTTGTCGTTGTTGCTGCTGTGCGGGTCCAGTGCGAG > NZ_CP009273/3681379‑3681546 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |