| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 3,853,103 | A→G | F125S (TTC→TCC) | yidK ← | solute:sodium symporter family transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 3,853,103 | 0 | A | G | 100.0% | 108.5 / NA | 29 | F125S (TTC→TCC) | yidK | solute:sodium symporter family transporter |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (10/19); total (10/19) | |||||||||||
GATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCCGCGCTTCAGAT > NZ_CP009273/3853016‑3853187 | gATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGACGCCGGTGGCAATTAGGGAGc < 1:183472/91‑1 (MQ=255) ttCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGACGCCGGTGGCAATTAGGGAGCAg > 2:765623/1‑91 (MQ=255) ttCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGACGCCGGTGGCAATTAGGGAGCAg > 1:860104/1‑91 (MQ=255) aCGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGACGCCGGTGGCAATTAGGGAGCAGAAGTCga < 2:81372/91‑1 (MQ=255) cGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGACGCCGGTGGCAATTAGGGAGCAGAAGTCgat < 1:598462/91‑1 (MQ=255) gTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGACGCCGGTGGCAATTAGGGAGCAGAAGTCgatg > 1:701364/1‑91 (MQ=255) tGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGACGCCGGTGGCAATTAGGGAGCAGAAGTCGATGATAATACGcgt < 1:765623/91‑1 (MQ=255) gTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGACGCCGGTGGCAATTAGGGAGCAGAAGTCGATGATAATACGcgtc < 1:111816/91‑1 (MQ=255) ttGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGACGCCGGTGGCAATTAGGGAGCAGAAGTCGATGATAATACGcgtcg > 2:487048/1‑91 (MQ=255) gcgcCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGACGCCGGTGGCAATTAGGGAGCAGAAGTCGATGATAATACGCGTCGtttt < 2:860104/91‑1 (MQ=255) ccGGAGTAGAGAACAATCGGCAGAAAGCAGACGCCGGTGGCAATTAGGGAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGtt < 1:396139/91‑1 (MQ=255) ggAGTAGAGAACAATCGGCAGAAAGCAGACGCCGGTGGCAATTAGGGAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTtcc < 1:654718/91‑1 (MQ=255) aCAATCGGCAGAAAGCAGACGCCGGTGGCAATTAGGGAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAAt < 2:205424/91‑1 (MQ=255) cAATCGGCAGAAAGCAGACGCCGGTGGCAATTAGGGAGCAGa < 2:485088/42‑1 (MQ=255) cAATCGGCAGAAAGCAGACGCCGGTGGCAATTAGGGAGCAGa > 1:485088/1‑42 (MQ=255) cAATCGGCAGAAAGCAGACGCCGGTGGCAATTAGGGAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATc > 2:605338/1‑91 (MQ=255) aTCGGCAGAAAGCAGACGCCGGTGGCAATTAGGGAGCAGAAGTCGATGATAATAc > 1:796465/1‑55 (MQ=255) aTCGGCAGAAAGCAGACGCCGGTGGCAATTAGGGAGCAGAAGTCGATGATAATAc < 2:796465/55‑1 (MQ=255) aTCGGCAGAAAGCAGACGCCGGTGGCAATTAGGGAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCgg > 1:656186/1‑91 (MQ=255) aTCGGCAGAAAGCAGACGCCGGTGGCAATTAGGGAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCgg > 2:61561/1‑91 (MQ=255) ggCAGAAAGCAGACGCCGGTGGCAATTAGGGAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGa < 1:487048/91‑1 (MQ=255) ggCAGAAAGCAGACGCCGGTGGCAATTAGGGAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGa < 2:560866/91‑1 (MQ=255) cAGAAAGCAGACGCCGGTGGCAATTAGGGAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGAtg > 1:804498/1‑91 (MQ=255) gCCGGTGGCAATTAGGGAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCcg < 2:225589/91‑1 (MQ=255) gCCGGTGGCAATTAGGGAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCcg < 2:474025/91‑1 (MQ=255) gCCGGTGGCAATTAGGGAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCcg < 1:61561/91‑1 (MQ=255) tGGCAATTAGGGAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCCGCGCtt < 1:482605/91‑1 (MQ=255) tGGCAATTAGGGAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCCGCGCtt < 1:305774/91‑1 (MQ=255) aTTAGGGAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCCGCGCTTCAGAt < 2:802645/91‑1 (MQ=255) | GATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGACGCCGGTGGCAATTAGGAAGCAGAAGTCGATGATAATACGCGTCGTTTTATCATAACGTTCCTCCAGAAAATCGGGGATGGTGGCAATGCCGCGCTTCAGAT > NZ_CP009273/3853016‑3853187 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |