| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 4,378,349 | T→C | D280G (GAT→GGT) | mscM ← | miniconductance mechanosensitive channel MscM |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 4,378,349 | 0 | T | C | 100.0% | 32.0 / NA | 10 | D280G (GAT→GGT) | mscM | miniconductance mechanosensitive channel MscM |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (6/4); total (6/4) | |||||||||||
TTGCGACTGTTCACGCAGCGTATTCAACGCCTGCCGGACCTGTAACGTCTGGCTGGCAGCCTGACGCTGTTGCGAGGCAACGAGATCCATCCGCTGCGCCTGTTGATTCAAAGCCGCCGATAGTTCGCGGTTAATTTTGAATTGCGCGACGATATCTTTCGGCAAATCGGCGC > NZ_CP009273/4378264‑4378436 | ttGCGACTGTTCACGCAGCGTATTCAACGCCTGCCGGACCTGTAACGTCTGGCTGGCCGCCTGACGCTGTTGCGAGGCAACGAGacccatc > 1:779796/1‑91 (MQ=255) gACTGTTCACGCAGCGTATTCAACGCCTGCCGGACCTGTAACGTCTGGCTGGCAGCCTGACGCTGTTGCGAGGCAACGAGACCCATCCGCt < 1:524361/91‑1 (MQ=255) gCGTATTCAACGCCTGCCGGACCTGTAACGTCTGGCTGGCAGCCTGACGCTGTTGCGAGGCAACGAGACCCATCCGCTGCGCCTGTTGAtt > 1:285346/1‑91 (MQ=255) ccTGCCGGACCTGTAACGTCTGGCTGGCAGCCTGACGCTGTTGCGAGGCAACGAGACCCATCCGCTGCGCCTGTTGATTCAAAGCCGCCGa > 2:3810/1‑91 (MQ=255) tGCCGGACCTGTAACGTCTGGCTGGCAGCCTGACGCTGTTGCGAGGCAACGAGACCCATCCGCTGCGCCTGTTGATTCAAAGCCGCCGATa > 1:120610/1‑91 (MQ=255) gTAACGTCTGGCTGGCAGCCTGACGCTGTTGCGAGGCAACGAGACCCATCCGCTGCGCCTGTTGATTCAAAGCCGCCGATAGTTCGCGGtt < 2:733273/91‑1 (MQ=255) gTCTGGCTGGCAGCCTGAGGCTGTTGCGAGGCAACGAGACCCATCCGCTGCGCCTGTTGATTCAAAGCCGCCGTTAGTTCGCGGTTAAttt > 2:64596/1‑91 (MQ=255) aaCGAGACCCATCCGCTGCGCCTGTTGATTCAAAGCCGCCGATAGTTCGCGGTTAATTTTGAATTGCGCGACGat > 1:820719/1‑75 (MQ=255) aaCGAGACCCATCCGCTGCGCCTGTTGATTCAAAGCCGCCGATAGTTCGCGGTTAATTTTGAATTGCGCGACGat < 2:820719/75‑1 (MQ=255) aaCGAGACCCATCCGCTGCGCCTGTTGATTCAAAGCCGCCGATAGTTCGCGGTTAATTTTGAATTGCGCGACGATATCTTTCGGCAAATCg > 1:473586/1‑91 (MQ=255) agaCCCATCCGCTGCGCCTGTTGATTCAAAGCCGCCGATAGTTCGCGGTTAATTTTGAATTGCGCGACGATATCTTTCGGCAAATCGgcgc < 1:247513/91‑1 (MQ=255) | TTGCGACTGTTCACGCAGCGTATTCAACGCCTGCCGGACCTGTAACGTCTGGCTGGCAGCCTGACGCTGTTGCGAGGCAACGAGATCCATCCGCTGCGCCTGTTGATTCAAAGCCGCCGATAGTTCGCGGTTAATTTTGAATTGCGCGACGATATCTTTCGGCAAATCGGCGC > NZ_CP009273/4378264‑4378436 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |