| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 1,306,087 | A→G | intergenic (+22/+18) | tonB → / ← yciA | TonB system transport protein TonB/acyl‑CoA thioester hydrolase YciA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,306,087 | 0 | A | G | 100.0% | 94.6 / NA | 26 | intergenic (+22/+18) | tonB/yciA | TonB system transport protein TonB/acyl‑CoA thioester hydrolase YciA |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (13/13); total (13/13) | |||||||||||
GGCAGTGGGATTGTGGTGAATATCCTGTTTAAAATTAACGGCACCACCGAAATTCAGTAAGCAGAAAGTCAAAAGCCTCCGACCGGAGGCTTTTGACTATTACTCAACAGGTAAGGCGCGAGGTTTTCCTTCAGGATCAACCGCGACATACTTAAATAATGCTTCTGT > NZ_CP009273/1306006‑1306173 | ggCAGTGGGATTGTGGTGAATATCCTGTTTAAAATTAACGGCACCACCGAAATTCAGTAAGCAGAAAGTCAAAAGCCTCCGGCCGGAGGCt > 1:336505/1‑91 (MQ=255)ggCAGTGGGATTGTGGTGAATATCCTGTTTAAAATTAACGGCACCACCGAAATTCAGTAAGCAGAAAGTCAAAAGCCTCCGGCCGGAGGCt > 1:442458/1‑91 (MQ=255) cAGTGGGATTGTGGTGAATATCCTGTTTAAAATTAACGGCACCACCGAAATTCAGTAAGCAGAAAGTCAAAAGCCTCCGGCCGGAGGCttt < 1:659971/91‑1 (MQ=255) tgtgGTGAATATCCTGTTTAAAATTAACGGCACCACCGAAATTCAGTAAGCAGAAAGTCAAAAGCCTCCGGCCGGAGGCTTTTGACTATTa > 2:196528/1‑91 (MQ=255) ggtgAATATCCTGTTTAAAATTAACGGCACCACCGAAATTCAGTAAGCAGAAAGTCAAAAGCCTCCGGCCGGAGGCTTTTg > 1:216860/1‑81 (MQ=255) ggtgAATATCCTGTTTAAAATTAACGGCACCACCGAAATTCAGTAAGCAGAAAGTCAAAAGCCTCCGGCCGGAGGCTTTTg < 2:216860/81‑1 (MQ=255) gAATATCCTGTTTAAAATTAACGGCACCACCGAAATTCAGTAAGCAGAAAGTCAAAAGCCTCCGGCCGGAGGCTTTTGACTATTACTCAAc < 1:223620/91‑1 (MQ=255) tCCTGTTTAAAATTAACGGCACCACCGAAATTCAGTAAGCAGAAAGTCAAAAGCCTCCGGCCGGAGGCTTTTGACTATTACTCAACAGGTa > 2:335198/1‑91 (MQ=255) ccTGTTTAAAATTAACGGCACCACCGAAATTCAGTAAGCAGAAAGTCAAAAGCCTCCGGCCGGAGGCTTTTGACTATTACTCAACAGGTaa < 1:538165/91‑1 (MQ=255) tGTTTAAAATTAACGGCACCACCGAAATTCAGTAAGCAGAAAGTCAAAAGCCTCCGGCCGGAg > 1:102732/1‑63 (MQ=255) tGTTTAAAATTAACGGCACCACCGAAATTCAGTAAGCAGAAAGTCAAAAGCCTCCGGCCGGAg < 2:102732/63‑1 (MQ=255) gTAAGCAGAAAGTCAAAAGCCTCCGGCCGGAGGCTTTTGACTATTACTCAACAGGTAAGGCGCGAGGTTTTCCTTCAGGATCAACCGCGAc < 1:335198/91‑1 (MQ=255) gTAAGCAGAAAGTCAAAAGCCTCCGGCCGGAGGCTTTTGACTATTACTCAACAGGTAAGGCGCGAGGTTTTCCTTCAGGATCAACCGCGAc < 1:719911/91‑1 (MQ=255) aaGCAGAAAGTCAAAAGCCTCCGGCCGGAGGCTTTTGACTATTACTCAACAGGTAAGgcgc < 2:524800/61‑1 (MQ=255) aaGCAGAAAGTCAAAAGCCTCCGGCCGGAGGCTTTTGACTATTACTCAACAGGTAAGgcgc > 1:524800/1‑61 (MQ=255) aGTCAAAAGCCTCCGGCCGGAGGCTTTTGACTATTACTCAACAGGTAAGGCGCGAGGTTTTCCTTCAGGATCAACCGCGACATACTTAaat > 2:585481/1‑91 (MQ=255) aaaGCCTCCGGCCGGAGGCTTTTGACTATTACTCAACAGGTAAGGCGCGAGGTTTTCCTTCAGGATCAACCGCGACATACTTAAATAATGc > 2:440204/1‑91 (MQ=255) gCCTCCGGCCGGAGGCTTTTGACTATTACTCAACAGGTAAGGCGCGAGGTTTTCCTTCAGGATCAACCGCGACATACTTAAATAATGCTTc > 2:266185/1‑91 (MQ=255) tCCGGCCGGAGGCTTTTGACTATTACTCAACAGGTAAGGCGCGAGGtttt > 1:559512/1‑50 (MQ=255) tCCGGCCGGAGGCTTTTGACTATTACTCAACAGGTAAGGCGCGAGGtttt > 2:258968/1‑50 (MQ=255) tCCGGCCGGAGGCTTTTGACTATTACTCAACAGGTAAGGCGCGAGGtttt > 2:287298/1‑50 (MQ=255) tCCGGCCGGAGGCTTTTGACTATTACTCAACAGGTAAGGCGCGAGGtttt < 1:287298/50‑1 (MQ=255) tCCGGCCGGAGGCTTTTGACTATTACTCAACAGGTAAGGCGCGAGGtttt < 2:559512/50‑1 (MQ=255) tCCGGCCGGAGGCTTTTGACTATTACTCAACAGGTAAGGCGCGAGGtttt < 1:258968/50‑1 (MQ=255) tCCGGCCGGAGGCTTTTGACTATTACTCAACAGGTAAGGCGCGAGGTTTTCCTTCAGGATCAACCGCGACATACTTAAATAATGCTTCTGt < 1:585481/91‑1 (MQ=255) tCCGGCCGGAGGCTTTTGACTATTACTCAACAGGTAAGGCGCGAGGTTTTCCTTCAGGATCAACCGCGACATACTTAAATAATGCTTCTGt < 1:517999/91‑1 (MQ=255) tCCGGCCGGAGGCTTTTGACTATTACTCAACAGGTAAGGCGCGAGGTTTTCCTTCAGGATCAACCGCGACATACTTAAATAATGCTTCTGt < 1:277983/91‑1 (MQ=255) | GGCAGTGGGATTGTGGTGAATATCCTGTTTAAAATTAACGGCACCACCGAAATTCAGTAAGCAGAAAGTCAAAAGCCTCCGACCGGAGGCTTTTGACTATTACTCAACAGGTAAGGCGCGAGGTTTTCCTTCAGGATCAACCGCGACATACTTAAATAATGCTTCTGT > NZ_CP009273/1306006‑1306173 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |